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...  A short sequence (R) is repeated at each end of the viral RNA, so the 5´ and 3´ ends are R-U5 and U3-R, respectively.  Reverse transcriptase starts synthesis when a tRNA primer binds to a site 100-200 bases from the 5´ end.  When the enzyme reaches the end, the 5´-terminal bases of RNA are degra ...
REGULATION OF GENE EXPRESSION
REGULATION OF GENE EXPRESSION

... Messenger RNAs, exported from the nucleus to the cytoplasm, are translated until they are degraded. Long-lived mRNAs give rise to more polypeptides than short-lived mRNAs. Thus, mRNA life time is another control point of gene expression. Actually, mRNA stability is one determinant of the efficiency ...
doc - University of California, Santa Cruz
doc - University of California, Santa Cruz

... More and more information is gained on pre-mRNA splicing mechanisms, but little is known about the biological and evolutionary significance of introns. We therefore need a simple way of investigating those, and the enzymes involved in the intron turnover pathway. The target enzyme of the study, the ...
The Cell in Motion
The Cell in Motion

... lysosomes are unable to function properly. This is I Cell disease, and affected individuals have severe symptoms like mental retardation. This example illustrates how a gene is linked to a disease. ...
Nucleotides and nucleic acids Structure of nucleotides Structure of
Nucleotides and nucleic acids Structure of nucleotides Structure of

Protein Synthesis - Napa Valley College
Protein Synthesis - Napa Valley College

... processing pre-mRNA, involved in splicing mRNA  signal recognition particle (SRP) is composed of protein and RNA and involved in directing ribosome to the RER  micro-RNA (miRNA) are very small and their role is not clear yet, control gene expression, protect cells ...
DNA
DNA

... • The first stage of gene expression is transcription • During transcription RNA is made from the information in DNA. • It is similar to copying (transcribing) notes from the board (DNA) into a notebook (RNA) • RNA is a copy of the original information found in DNA ...
Quantitative RT-PCR
Quantitative RT-PCR

... a. Design both 5' sense primer and 3' antisense primer for PCR following the classical parameters for primer design. The 3' primer will also be used for reverse transcription. The length of the amplified fragment should be within a reasonable range, e.g., around 200-600 bp, for the preparation of co ...
AIBSTCT Nucleic Acids Research - Walter Lab
AIBSTCT Nucleic Acids Research - Walter Lab

... the selected clone coded for human SRP19 and that the determined sequences are identical in the human and the canine protein. Isolation of a full-length cDNA clone encoding SRP19 In order to obtain a full-length cDNA clone, a cDNA library from human liver was screened with the radiolabelled 507bp Ps ...
6.4 RNA - Part 2 - Translation rna_2_s12
6.4 RNA - Part 2 - Translation rna_2_s12

Chapter 15: Genes and How They Work
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... Crick and his colleagues reasoned that the genetic code most likely consisted of a series of blocks of information called codons, each corresponding to an amino acid in the encoded protein. They further hypothesized that the information within one codon was probably a sequence of three nucleotides s ...
L12 - flat - Biology Courses Server
L12 - flat - Biology Courses Server

... Shine-Delgarno sequence is 5’ (upstream) of initiation codon (AUG) on mRNA (in 5’ UTR) ...
The Genetic Code and Translation
The Genetic Code and Translation

... – There are 64 different codons, but only 20 amino acids. (So, there may be more than one codon for an amino acid.) – AUG codes for methionine (the “start” codon) • Signals the beginning of protein production ...
Transcription | Principles of Biology from Nature Education
Transcription | Principles of Biology from Nature Education

... © 2011 Nature Education All rights reserved. Eukaryotes also use enhancer sequences, which increase the efficiency of transcription initiation of the corresponding gene. Enhancers may be located hundreds or thousands of base pairs from the promoter and are brought to the promoter by DNA looping. Thi ...
Decoding the Flu
Decoding the Flu

... “Great! You found the start for the HA gene coding region. Here are HA genes data the team had collected for the flu strains that they were studying. We only have information on the start of the gene, but it might be enough.” The virus that the team has contracted probably had a mutation that resul ...
Chapter 13 - Gene Function
Chapter 13 - Gene Function

... Chapter 13 - Gene Function Mutations How do mutations in our DNA lead to phenotypic changes? Two categories of mutations Point mutations – change in a single DNA base which leads to: 1. Missense mutation – change in amino acid due to the DNA base change 2. Nonsense mutation – DNA base change causes ...
Decoding the Flu - National Center for Case Study Teaching in
Decoding the Flu - National Center for Case Study Teaching in

... “Great! You found the start for the HA gene coding region. Here are HA genes data the team had collected for the flu strains that they were studying. We only have information on the start of the gene, but it might be enough.” The virus that the team has contracted probably had a mutation that resul ...
Decoding the Flu - Castle High School
Decoding the Flu - Castle High School

... “Great! You found the start for the HA gene coding region. Here are HA genes data the team had collected for the flu strains that they were studying. We only have information on the start of the gene, but it might be enough.” The virus that the team has contracted probably had a mutation that resul ...
Promoters
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... containing lac UV5 promoter, heparin to bind any free RNA polymerase • Heparin: negatively charged polysaccharide that competes with DNA in binding tightly to free RNA polymerase • Abortive transcripts would be up to 9-10 nt in size. ...
DNA Replication, Transcript
DNA Replication, Transcript

... hypothesis • In the early 1940s, experimental work was performed which led to the hypothesis that every one gene of DNa produced one enzyme. Which was soon amended to include all proteins. • It was later discovered that many proteins are actually composed of more than one polypeptide and it was prop ...
Reverse_Transcription_PCR
Reverse_Transcription_PCR

... • RT enzymes derive from M-MLV or AMV by purification of the virus or expression in E.coli • RT enzyme has two activity: DNA polymerase and RNase H Training Course: PCR-based Techniques in Radiobiology and Low-Dose Risk Research, NRIRR, Budapest, Hungary. 2016 ...
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Translation Notes

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Bionano
Bionano

... nucleic acids by focusing in particular on hairpins. These structures consist of single strands of DNA or RNA whose ends are self-complementary, such that they loop back on themselves to form a duplex "stem" connected to a single-stranded loop (inset below). Hairpins not only provide a model system ...
Biological Science, 4e (Freeman)
Biological Science, 4e (Freeman)

... B) RNA is synthesized C) proteins are synthesized Answer: C 11) Under which conditions would it post-translational control be useful? And what would be the downside of this? A) Post-translational control doesn’t cost a lot of energy, and is useful when a high efficiency of control is required. The d ...
CHNOPS Simulating Protein Synthesis
CHNOPS Simulating Protein Synthesis

... Genes are the units that determine inherited characteristics, such as hair color and blood type. Genes are lengths of DNA molecules that determine the structure of polypeptides (the building blocks of proteins) that our cells make. The sequence of nucleotides in DNA determines the sequence of amino ...
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Polyadenylation



Polyadenylation is the addition of a poly(A) tail to a messenger RNA The poly(A) tail consists of multiple adenosine monophosphates; in other words, it is a stretch of RNA that has only adenine bases. In eukaryotes, polyadenylation is part of the process that produces mature messenger RNA (mRNA) for translation. It, therefore, forms part of the larger process of gene expression.The process of polyadenylation begins as the transcription of a gene finishes, or terminates. The 3'-most segment of the newly made pre-mRNA is first cleaved off by a set of proteins; these proteins then synthesize the poly(A) tail at the RNA's 3' end. In some genes, these proteins may add a poly(A) tail at any one of several possible sites. Therefore, polyadenylation can produce more than one transcript from a single gene (alternative polyadenylation), similar to alternative splicing.The poly(A) tail is important for the nuclear export, translation, and stability of mRNA. The tail is shortened over time, and, when it is short enough, the mRNA is enzymatically degraded. However, in a few cell types, mRNAs with short poly(A) tails are stored for later activation by re-polyadenylation in the cytosol. In contrast, when polyadenylation occurs in bacteria, it promotes RNA degradation. This is also sometimes the case for eukaryotic non-coding RNAs.mRNA molecules in both prokaryotes and eukaryotes have polyadenylated 3'-ends, with the prokaryotic poly(A) tails generally shorter and less mRNA molecules polyadenylated.
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