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chapter 19 the organization and control of eukaryotic genomes
chapter 19 the organization and control of eukaryotic genomes

...  A given gene may have multiple enhancers, each active at a different time or in a different cell type or location in the organism.  Interactions between enhancers and specific transcription factors called activators or repressors are important in controlling gene expression.  An activator is a p ...
Chapter 4: Cytogenetics
Chapter 4: Cytogenetics

... These four double-stranded DNA molecules represent replicated copies of two homologous chromosomes carrying different alleles for genes A and B. Recombination between two of these molecules begins when an endonuclease nicks one strand of a double helix and unwinds the DNA. The nicked strand invades ...
Molecular Beacon Product Sheet
Molecular Beacon Product Sheet

... have been coupled to optical, piezoelectric and electrochemical transduction, for the development of a new generation of biosensors. The immobilization of the aptamer on a solid support must avoid any steric hindrance or constraint which could prevent the folding of the aptamer in the correct confor ...
PURExpress® Δ Ribosome Kit
PURExpress® Δ Ribosome Kit

... A rapid method for gene expression analysis, PURExpress® is a novel cell-free transcription/translation system reconstituted from the purified components necessary for E. coli translation. The relative nuclease-free and protease-free nature of the PURExpress platform preserves the integrity of DNA a ...
The chemical components in DNA
The chemical components in DNA

... (2) The bases are dominantly in keto tautomeric forms. (3) DNA is in helical structure. The planar aromatic bases forms a parallel rings which is parallel to the helical axis. The Watson-Crick B-DNA structure B-DNA is regarded as the biologically functional native form of DNA. The features of B-DNA ...
Chapter 04
Chapter 04

... DNA contains a code that enables a cell to make RNA and proteins. Replication copies the DNA code before a cell divides. • DNA’s triplet code enables a cell to code for proteins. ...
Figure 1 - York College of Pennsylvania
Figure 1 - York College of Pennsylvania

... Reverse Primer ...
Chapter_10_HB_Molecular_Biology
Chapter_10_HB_Molecular_Biology

... 10.7 Genetic information written in codons is translated into amino acid sequences • Genetic information flows from DNA RNA protein • Nucleotide monomers represent letters in an alphabet that can form words in a language ...
Practical Assignment - H3ABioNet training course material
Practical Assignment - H3ABioNet training course material

... c. How many protein-coding transcripts have been annotated for the gene? d. Provide a brief description of the function of the protein encoded by the LDLR gene. e. What is the accession number for the genomic sequence for the GenBank entry for the gene? f. Is there a RefSeq entry for the LDLR gene? ...
RNA PCR Kit (AMV)
RNA PCR Kit (AMV)

... Depend on many factors, the primer for reverse transcription should be selected from either of Random 9 mers, Oligo dT-Adaptor Primer, or specific downstream PCR primer. For short mRNAs with no hairpin structure, any one of the above three primers can be used. [ General guideline of the primer sel ...
Extensive post-transcriptional regulation of miRNAs within
Extensive post-transcriptional regulation of miRNAs within

... Imperial College London, London, United Kingdom ...
BIO 101 Study Guide Exam 4 Patterns of Inheritance Chapter 9
BIO 101 Study Guide Exam 4 Patterns of Inheritance Chapter 9

... The Flow of Genetic Information from DNA to RNA to Protein A) Describe the locations, reactants, and products of transcription and translation. B) Explain how the “languages” of DNA and RNA are used to produce polypeptides. C) Explain how RNA is produced. D) Explain how eukaryotic RNA is processed b ...
July 2012 Volume 22 In This Issue Dazzling Diamond of Hope
July 2012 Volume 22 In This Issue Dazzling Diamond of Hope

... must contribute to spliceosome recognition. These other sequences however are far less conserved from one intron to another so their relative importance to splicing can be challenging to discern 2. This rather lengthy lead in brings us to this month's Journal Club. Recently a paper was published tha ...
Chapter 11: DNA: The Molecule of Heredity
Chapter 11: DNA: The Molecule of Heredity

... What makes up the "rungs" of DNA? ____________________ What will pair with adenine? _____________ Color the thymines orange. Color the adenines green. Color the guanines purple. Color the cytosines yellow. ***Note that that the bases attach to the sides of the ladder at the sugars and not the phosph ...
159 Kb
159 Kb

... In other respects, the archaea lie much closer to the eukaryotes. Although they do not have as many genes as eukaryotes, archaea have on average more than twice as many genes as bacteria. The DNA of archaea is not naked, but is wrapped in proteins similar to those used by eukaryotes. The detailed me ...
Applied molecular technique
Applied molecular technique

... degrades the peptidoglycan layer of the cell wall. A successive treatment with detergent dissolves the lipids of the cell membrane. Chelating agents, such as EDTA (ethylene diamine tetraacetate), are also used, especially with gram-negative bacteria, to remove the metal ions that bind components of ...
From DNA to Proteins
From DNA to Proteins

... The double helix shape of DNA, together with Chargaff’s rules, led to a better understanding of DNA. DNA, as a nucleic acid, is made from nucleotide monomers, and the DNA double helix consists of two polynucleotide chains. Each nucleotide consists of a sugar (deoxyribose), a phosphate group, and a n ...
Structure and function of DNA
Structure and function of DNA

...  The polymerization of nucleotides to form nucleic acids occur by condensation reaction by making phospho-diester bond between 5’ phosphate group of one nucleotide and 3’ hydroxyl group of another ...
Structure and function of DNA
Structure and function of DNA

...  The polymerization of nucleotides to form nucleic acids occur by condensation reaction by making phospho-diester bond between 5’ phosphate group of one nucleotide and 3’ hydroxyl group of another ...
Nucleic Acids and the Genetic Code
Nucleic Acids and the Genetic Code

... cell, so to fit it needs to be tightly coiled and folded. Eukaryotic DNA is associated with proteins called histones. Together, these form chromatin – the substance from which chromosomes are made. In prokaryotic cells, DNA is loose in the cytoplasm – there are no histones or chromosomes. 11 of 36 ...
Differential activity of Rickettsia rickettsii ompA and ompB promoter
Differential activity of Rickettsia rickettsii ompA and ompB promoter

... relatively long 5' untranslated region (UTR) o f 130 nucleotides (nt), as determined by primer extension mapping on transcripts f r o m rickettsia-infected V e r o cells (Gilmore e t al., 1991). T h e rompA gene also contains a single transcription start site, while its 5' UTR is 31 n t in length (P ...
Fig. 17.1 Levels at which gene expression can be controlled in
Fig. 17.1 Levels at which gene expression can be controlled in

... • Why is eukaryotic gene expression more complex than prokaryotic? • Name six different levels at which gene expression might be controlled. • What evidence has shown the role of chromosome packaging and histone proteins in gene regulation? • What role does DNA methylation play? • What are DNA bindi ...
missense mutations
missense mutations

... Frameshift Mutations • Frameshift mutations result from the insertion or deletion of one or more bases into or from the DNA sequence. • This alters the grouping of nucleotides into three-base codons, causing a shift in the “reading frame” during translation. • The resulting protein is usually nonfu ...
The geranylgeranyl pyrophosphate synthase gene from Ginkgo
The geranylgeranyl pyrophosphate synthase gene from Ginkgo

... of the GGDPS gene of G. biloba (designated GbGGDPS GenBank accession number EF646377) was 2135 bp in length containing an 1176-bp open reading frame (ORF) that encoded a 391-amino acid polypeptide. Comparative analysis showed that GbGGDPS had a high similarity to other plant GGDPSs. Bioinformatic an ...
Transcription start sites
Transcription start sites

... • transcripts span large regions, even between genes ...
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Non-coding RNA



A non-coding RNA (ncRNA) is an RNA molecule that is not translated into a protein. Less-frequently used synonyms are non-protein-coding RNA (npcRNA), non-messenger RNA (nmRNA) and functional RNA (fRNA). The DNA sequence from which a functional non-coding RNA is transcribed is often called an RNA gene.Non-coding RNA genes include highly abundant and functionally important RNAs such as transfer RNAs (tRNAs) and ribosomal RNAs (rRNAs), as well as RNAs such as snoRNAs, microRNAs, siRNAs, snRNAs, exRNAs, and piRNAs and the long ncRNAs that include examples such as Xist and HOTAIR (see here for a more complete list of ncRNAs). The number of ncRNAs encoded within the human genome is unknown; however, recent transcriptomic and bioinformatic studies suggest the existence of thousands of ncRNAs., but see Since many of the newly identified ncRNAs have not been validated for their function, it is possible that many are non-functional. It is also likely that many ncRNAs are non functional (sometimes referred to as Junk RNA), and are the product of spurious transcription.
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