Problem set questions from Exam 3 – Eukaryotic Gene Regulation
... B, and the reporter. Also be sure to indicate where and how the inducer X acts. (b) In order to distinguish between the two models from part (a), an epistasis test would be useful. Because the mutations that have been isolated in the A and B genes have the same phenotype (uninducible), it is not pos ...
... B, and the reporter. Also be sure to indicate where and how the inducer X acts. (b) In order to distinguish between the two models from part (a), an epistasis test would be useful. Because the mutations that have been isolated in the A and B genes have the same phenotype (uninducible), it is not pos ...
NSF project meeting presentation 2009
... Mutant-assisted exploration of natural variation underlying R gene-mediated immunity in maize 1. Survey the entire panel of maize diversity lines (association mapping panel) for their ability to impact HR induced by Rp1-D21. • Between Peter’s and our lab, we have crossed most diversity inbreds with ...
... Mutant-assisted exploration of natural variation underlying R gene-mediated immunity in maize 1. Survey the entire panel of maize diversity lines (association mapping panel) for their ability to impact HR induced by Rp1-D21. • Between Peter’s and our lab, we have crossed most diversity inbreds with ...
XWAS (version 1.1): a toolset for chromosome X
... Before feeding data to the XWAS QC pipeline, we need to pre-process the data so that interdependent individuals are removed. Specifically, for parent-child pairs, only parents are retained and the children are removed. For siblings, only one is arbitrarily chosen and the rest are removed. All indivi ...
... Before feeding data to the XWAS QC pipeline, we need to pre-process the data so that interdependent individuals are removed. Specifically, for parent-child pairs, only parents are retained and the children are removed. For siblings, only one is arbitrarily chosen and the rest are removed. All indivi ...
exercises - Evolutionary Genomics Group
... A program has been written which accesses the NCBI webpage, downloads the individual GenBank files and puts them together. The resulting GenBank file contains multiple GenBank files pasted together, one after another. The program is called getgbk and uses a GPID or a NCBI accession number as an argu ...
... A program has been written which accesses the NCBI webpage, downloads the individual GenBank files and puts them together. The resulting GenBank file contains multiple GenBank files pasted together, one after another. The program is called getgbk and uses a GPID or a NCBI accession number as an argu ...
Integrated genome sequence and linkage map of physic nut
... iodide, is about 416 Mbp (Carvalho et al., 2008). A large proportion of the heterochromatic DNA, such as centromeric and pericentromeric DNA, was probably not assembled by the WGS process, but more than 94% of the available ESTcDNA data for physic nut and about 87% of that for J. integerrima was cov ...
... iodide, is about 416 Mbp (Carvalho et al., 2008). A large proportion of the heterochromatic DNA, such as centromeric and pericentromeric DNA, was probably not assembled by the WGS process, but more than 94% of the available ESTcDNA data for physic nut and about 87% of that for J. integerrima was cov ...
The Genetic Code and RNA-Amino Acid Affinities
... kinds of selection experiments. One can do large experiments to seek large active motifs, but this usually implies looking among sparsely sampled molecules, because not all sequences of long lengths are present. Alternatively, one can look for smaller motifs, using RNA populations that contain many ...
... kinds of selection experiments. One can do large experiments to seek large active motifs, but this usually implies looking among sparsely sampled molecules, because not all sequences of long lengths are present. Alternatively, one can look for smaller motifs, using RNA populations that contain many ...
"Vectors in Gene Therapy". In: An Introduction to Molecular Medicine
... The PP tract therefore serves as the primer for synthesis of the second DNA strand. The packaging signal binds to the nucleocapsid protein of a retroviral particle allowing the genomic RNA to be selectively packaged. Although the encapsidation sequence was initially mapped to the region of the virus ...
... The PP tract therefore serves as the primer for synthesis of the second DNA strand. The packaging signal binds to the nucleocapsid protein of a retroviral particle allowing the genomic RNA to be selectively packaged. Although the encapsidation sequence was initially mapped to the region of the virus ...
CyO / cn bw let-a?
... what genes work with sevenless to control this developmental decision? Found those other genes by making them “artificially” haploinsufficient with respect to the sev function, but NOT haploinsufficient with respect to other functions that they might have. ...
... what genes work with sevenless to control this developmental decision? Found those other genes by making them “artificially” haploinsufficient with respect to the sev function, but NOT haploinsufficient with respect to other functions that they might have. ...
Identifying Signatures of Natural Selection in Tibetan Data
... hypoxia. We looked across each chromosome to identify genomic regions with previously unknown function with respect to altitude phenotypes. In addition, groups of genes functioning in oxygen metabolism and sensing were examined to test the hypothesis that particular pathways have been involved in ge ...
... hypoxia. We looked across each chromosome to identify genomic regions with previously unknown function with respect to altitude phenotypes. In addition, groups of genes functioning in oxygen metabolism and sensing were examined to test the hypothesis that particular pathways have been involved in ge ...
Birth of fertile bimaternal offspring following
... with more than 1 FPKM were shown. The red and blue points represent imprinted genes expressed from maternal and paternal alleles, respectively. Dashed lines depict 2-fold changes. The R2 was determined by Pearson’s correlation. (D) Five imprinted genes with more than 2-fold changes in expression lev ...
... with more than 1 FPKM were shown. The red and blue points represent imprinted genes expressed from maternal and paternal alleles, respectively. Dashed lines depict 2-fold changes. The R2 was determined by Pearson’s correlation. (D) Five imprinted genes with more than 2-fold changes in expression lev ...
Learn More - Montgomery County Community College
... be completed by course faculty using the listed evaluation method(s). Aggregated results will be submitted to the Associate Vice President of Academic Affairs. The benchmark for each learning outcome is that 70% of students will meet or exceed outcome criteria. SEQUENCE OF TOPICS: ...
... be completed by course faculty using the listed evaluation method(s). Aggregated results will be submitted to the Associate Vice President of Academic Affairs. The benchmark for each learning outcome is that 70% of students will meet or exceed outcome criteria. SEQUENCE OF TOPICS: ...
Chapter 10
... data available for analysis and comparison. In addition to the genome sequences, methods are also available for identifying which genes in the genome are transcribed in particular tissue types, at specific times in development, or at different stages of the cell cycle. These are the raw data of geno ...
... data available for analysis and comparison. In addition to the genome sequences, methods are also available for identifying which genes in the genome are transcribed in particular tissue types, at specific times in development, or at different stages of the cell cycle. These are the raw data of geno ...
Causes, Risks, Prevention
... Cancer in Men? A risk factor is anything that affects your chance of getting a disease such as cancer. Different cancers have different risk factors. For example, exposing skin to strong sunlight is a risk factor for skin cancer. Smoking is a risk factor for cancers of the lung, mouth, larynx (voice ...
... Cancer in Men? A risk factor is anything that affects your chance of getting a disease such as cancer. Different cancers have different risk factors. For example, exposing skin to strong sunlight is a risk factor for skin cancer. Smoking is a risk factor for cancers of the lung, mouth, larynx (voice ...
Lung Cancer Research Update
... Over the past four years, more than 1,000 lung cancer patients and their relatives have participated in our study. The efforts of these participants and our research team have led to three national grant awards for research and more than 10 scientific publications. These achievements would not have ...
... Over the past four years, more than 1,000 lung cancer patients and their relatives have participated in our study. The efforts of these participants and our research team have led to three national grant awards for research and more than 10 scientific publications. These achievements would not have ...
Scopus EXPORT DATE:24 Jan 2016 Doulami, G.a , Triantafyllou
... and technical failure of stapling devices have been reported as the main risk factors of postoperative leak. The aim of this study was to evaluate the impact of ischemia and intraluminal pressure in leak appearance. Methods: Landrace swine (n = 12) were subjected to SG and total gastrectomy subseque ...
... and technical failure of stapling devices have been reported as the main risk factors of postoperative leak. The aim of this study was to evaluate the impact of ischemia and intraluminal pressure in leak appearance. Methods: Landrace swine (n = 12) were subjected to SG and total gastrectomy subseque ...
Isolation and characterization of an RNA that binds with high affinity
... 4B). By contrast, after addition of a similar amount of tRNA (total tRNA from yeast) the basal level of transcription remained either unaffected or was only marginally reduced (about 10-20%; see F i g . 4). These results demonstrate that factors that are important in the transcription process can bi ...
... 4B). By contrast, after addition of a similar amount of tRNA (total tRNA from yeast) the basal level of transcription remained either unaffected or was only marginally reduced (about 10-20%; see F i g . 4). These results demonstrate that factors that are important in the transcription process can bi ...
RefGen_v3_status_20120522
... the International Nucleotide Sequence Database Collaboration (INSDC), also known as DDBJ/EMBL/GenBank: 1) B73 RefGen_v2 pseudomolecule scaffold sequence and AGP (short for “A Golden Path”, the table that specifies how the component contigs are combined to build the pseudomolecule scaffold sequences) ...
... the International Nucleotide Sequence Database Collaboration (INSDC), also known as DDBJ/EMBL/GenBank: 1) B73 RefGen_v2 pseudomolecule scaffold sequence and AGP (short for “A Golden Path”, the table that specifies how the component contigs are combined to build the pseudomolecule scaffold sequences) ...
VegT activates Bix4 to specify endodermal
... upstream regulatory region. Two T-box binding sites contained within the Bix4 promoter prove to be both necessary and sufficient for mesodermal and endodermal expression of reporter genes in transgenic Xenopus embryos and, remarkably, a single T-box binding site is able to act as a mesoderm-specific ...
... upstream regulatory region. Two T-box binding sites contained within the Bix4 promoter prove to be both necessary and sufficient for mesodermal and endodermal expression of reporter genes in transgenic Xenopus embryos and, remarkably, a single T-box binding site is able to act as a mesoderm-specific ...
12–4 Mutations - Gravette School District
... they occur at a single point in the DNA sequence. Point mutations include substitutions, in which one base is changed to another, as well as insertions and deletions, in which a base is inserted or removed from the DNA sequence. Substitutions usually affect no more than a single amino acid. The effe ...
... they occur at a single point in the DNA sequence. Point mutations include substitutions, in which one base is changed to another, as well as insertions and deletions, in which a base is inserted or removed from the DNA sequence. Substitutions usually affect no more than a single amino acid. The effe ...
the Liver - Saudi Medical Journal
... associated with embryo loss (8). Anti inflammatory cytokines such as IL10 appear to protect against inflammation-induced miscarriage (9). Research efforts have focused on single nucleotide polymorphisms (SNP) in cytokine genes (1,5), and various SNPs have been reported to be associated with infectio ...
... associated with embryo loss (8). Anti inflammatory cytokines such as IL10 appear to protect against inflammation-induced miscarriage (9). Research efforts have focused on single nucleotide polymorphisms (SNP) in cytokine genes (1,5), and various SNPs have been reported to be associated with infectio ...
Cloning and Sequencing of a Gene from Bacillus
... division - are highly conserved (Dubnau et al., 1965a, b ; Seki et al., 1975, 1979). Interspecific transformation of sporulation genes spoOA, spoOB, s p d F and s p d H with B. amyloliquefaciens H strain as donor and B. subtilis as recipient has been reported by Hoch & Mathews (1973), although simil ...
... division - are highly conserved (Dubnau et al., 1965a, b ; Seki et al., 1975, 1979). Interspecific transformation of sporulation genes spoOA, spoOB, s p d F and s p d H with B. amyloliquefaciens H strain as donor and B. subtilis as recipient has been reported by Hoch & Mathews (1973), although simil ...
DNA methylation profile in human CD4+ T cells identifies
... chromatin accessibility and regulating gene expression. This epigenetic mechanism plays an important role in T cell function. We used genome-wide methylation profiling to characterize the DNA methylome in primary human CD4+ T cells. We found that only 5% of CpG islands are methylated in CD4+ T cells ...
... chromatin accessibility and regulating gene expression. This epigenetic mechanism plays an important role in T cell function. We used genome-wide methylation profiling to characterize the DNA methylome in primary human CD4+ T cells. We found that only 5% of CpG islands are methylated in CD4+ T cells ...
RNA-Seq
RNA-seq (RNA sequencing), also called whole transcriptome shotgun sequencing (WTSS), is a technology that uses the capabilities of next-generation sequencing to reveal a snapshot of RNA presence and quantity from a genome at a given moment in time.