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Gene Regulation and Structure Grade 10 Biology Spring 2011  Describe how the lac operon is turned on and off  Summarize the role of transcription factors in regulating eukaryotic gene expression  Describe how eukaryotic genes are organized  Evaluate three ways that point mutations can alter genetic material  Prokaryotes have about 2,000 genes  Humans have about 30,000 genes  Not all of genes are transcribed and translated at the same time  So as not to waste energy and materials  Both are able to regulate gene expression depending on cell’s needs  E.   Coli Prokaryote Gene regulation well undestood- lac operon gene  E. Coli is in the intestinal tract  Lactose from milk enters and becomes available to E. Coli  E. Coli (bacteria) can absorb lactose and break it down for energy  Recognizing, consuming, and breaking down lactose, into glucose and galactose, requires 3 different enzymes on 3 different genes 3 lactose metabolizing genes are located next to each other  Controlled by the same promoter site  On-off switch   “turns on” (transcribes and then translates) the 3 genes when lactose is present “turns off” genes when lactose is not available  Operator:   Piece of DNA that overlaps promoter site and serves as on-off switch Able to control RNA polymerase’s access to 3 lactose metabolizing genes  Promoter:  Area in which RNA polymerase binds and allows the genes to be transcribed  Repressor   protein: Protein that binds to an operator and physically blocks RNA polymerase from binding to promoter site Stops transcription of genes in operon  Operon:  A group of genes that code for the enzymes involved in the same function, their promoter site, and the operator that controls them all  Lac  Operon: Operon that controls the metabolism of lactose  Repressor protein turns the operon off  Repressor protein binds to the operator and blocks RNA polymerase from binding to the promoter site  Blocking of RNA polymerase stops the transcription of genes in the operon  Lactose binds to repressor protein and changes repressor proteins shape  Change of shape causes repressor protein to fall off of the operator  Now the RNA polymerase is free to bind to the promoter (no longer blocked)  RNA polymerase can transcribe the genes that code for the lactose metabolizing enzymes  By producing the enzymes only when the nutrient is available, the bacterium (E. coli) saves energy  Lets watch a video to review the lac operon!  Contain more DNA than prokaryotes  Must continually turn genes on and off  Operons are not common in eukaryotes  Instead, genes with related functions are often scattered on different chromosomes  Because there is a nuclear envelope that physically separates transcription from translation more opportunities for gene regulation  Gene     regulation can occur: Before transcription During transcription After transcription And after mRNA leaves the nucleus or after translation, when protein is functional  Most gene regulation in eukaryotes controls the onset of transcription  When RNA polymerase binds to a gene  Use regulatory proteins- called transcription factors  But many more proteins involved and more complex  Transcription   factors: Help arrange RNA polymerases in the correct position on the promoter Gene can be influenced by many different transcription factors Enhancer: sequence of DNA that can be bound by a transcription factor  Located thousands of nucleotide bases away from promoter  Loop in DNA may bring enhancer and its attached transcription factor (activator) into contact with the transcription factors and RNA polymerase at the promoter   In eukaryotes many genes are interrupted by introns  Introns: long segments of nucleotides that have no coding information  Exons: portions of a gene that are translated (expressed) into proteins  After gene is transcribed, introns in mRNA are cut out by splicosomes  Splicosomes: complex assemblies of RNA and protein  Exons that remain are “stitched” back together by slicosome to form a smaller mRNA molecule  mRNA is then translated  Each exon encodes part of protein  By having introns and exons cells can occasionally shuffle exons to make new genes  Play an evolutionary role  Thousands of proteins that occur seem to have arisen from a few thousand exons  Some genes exist in multiple copies  Mutation:  change in the DNA of a gene Rare  Mutations in gametes can be passed on to offspring, those in body cells (somatic cells) cannot  Gene Rearrangements: mutations that move an entire gene to a new location   Disrupt genes function, gene is exposed to new regulatory conditions Ex. You move to France and can’t speak French  Two 1. 2. types of Gene Rearrangements: Tranposition: genes are carried by moving transposons Chromosomal Rearrangement: portions of the chromosome containing a gene may be rearranged during meiosis  Gene Alterations: mutations that change a gene   Usually result in the placement of the wrong amino acid during protein assembly Usually disrupts protein’s function  Three types of Gene Alterations: Point Mutations: single nucleotide changes Insertion Mutation: sizable length of DNA is inserted into a gene 1. 2.  Often result when mobile segments of DNA (transposons) move randomly from one position to another on a chromosome Deletion Mutation: segments of gene are lost 3.  Often during meiosis Point Mutation Deletion Mutation Insertion Mutation  Genetic message is read as a series of triplet nucleotide  Insertions and deletions can upset the triplet groupings  Ex. Delete the C from this sentence, keep letters in triplets   THE CAT ATE THE ATA TE  meaningless  Frameshift Mutation: mutation that causes gene to be read in the wrong 3-nucleotide sequence  http://www.youtube.com/watch?v=gqvYOr78 THo Activity Modeling Introns and Exons (p. 218)  Procedure:  Place a 15-20cm strip of masking tape on your desk. Tape represents a gene.  Use 2 colours to write the words APPROPRIATLY JOINED on the tape exactly as shown. Space the letters so that they take up the entire length of the tape. The segments in one colour represent introns; those in the other colour represent exons.  Lift the tape. Working from left to right, cut apart the groups of letters written in the same colour. Stick the pieces of tape to your desk, making two strips according to colour and joining the pieces in their original order.   Activity Modeling Introns and Exons (p. 218)  Analysis   Determine from the resulting two strips which strip is made of introns and which is made of exons Predict what might happen to a protein if an intron were not removed
 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
									 
                                             
                                             
                                             
                                             
                                             
                                             
                                             
                                             
                                             
                                             
                                            