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Specialization
Clinical
Imaging
BioInformatics Public Health
Core
Informatics Methods in
Biomedicine:
Evaluation
Decision Making
Information Systems
Foundations of a
Profession
Data Representation
Methods
(formal models)
Computer Science
Information Presentation
Statistics
Biomedical
Specialization
Core
Clinical
Evaluation
Imaging
BioInformatics Public Health
Decision Making
Data Representation
Methods
(formal models)
Computer Science
Information Systems
Information Presentation
Statistics
Biomedical
Specialization
Core
Clinical
Evaluation
Imaging
BioInformatics Public Health
Post-doc
Decision Making
Information Systems
Clinical
Data Representation
Methods
(formal models)
Computer Science
Information Presentation
Statistics
Preclinical
Biomedical
Specialization
Clinical
Formal
Mathematical,
technical
ImagingEmpirical
Health
BioInformatics Public
Applied
Cognitive,
behavioral,
organizational
A core set of
methods for
implementing and
evaluating
Information
Systems
solutions
Core
•Ontology
Evaluation
Decision Making
•Database theory
•Experimental
•SignalData
processing
design
Representation
Information Presentation
•Sequence
•Data modeling
•Deployment
analysis
•Visualization
methods
•Formal grammars
•Decision analysis
•Implementation
•Process models
•Project
issues
Methods
Statistics
(formal
models)
•Software
management
•Assess impact
Computer Science •User interfaceBiomedical
engineering
Specialization
Core
Clinical
Evaluation
Imaging
BioInformatics Public Health
Decision Making
Data Representation
Methods
(formal models)
Computer Science
Information Systems
Information Presentation
Statistics
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Computer Science
Can apply computational techniques to
manage data,develop software and solve
problems Decision Making
Evaluation
Information Systems
• Database
Systems
Data Representation
Information Presentation
• Machine Learning
Methods
• Programming and
Problem Solving
(formal models)
Science
• Computer
Advanced
Software Engineering
Biomedical
Statistics
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Statistics
Can
apply mathematical
toSystems
analyze
Evaluation
Decision Makingtechniques
Information
data and test hypotheses
Data Representation
Information Presentation
• Introduction to Biostatistics
• Introduction to Biostatistical Methods
Methods
(formal models)
Computer Science
Statistics
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Biomedical
Is conversant with concepts, terminology,
institutions, professionals, and methods of
biomedical domain
Evaluation
Decision Making
Information Systems
• Biochemistry
and Molecular
Biology
Data Representation
Information
Presentation
• Acculturation to Medicine
• Physiology
Methods
(formal models)
Science
• Computer
Epidemiology
Statistics
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Informatics Knowledge
Is familiar with theories and results in Medical
Informatics, and able to apply basic methods
to solve problems
Evaluation
Decision Making
Information Systems
• Methods in Medical Informatics (logic,
Data Representation
Information Presentation
decision science, cognitive
science)
• Introduction to Medical Informatics
Applications Methods
(formal models)
Computer Science
Biomedical
Statistics
Specialization
Core
Imaging BioInformatics
Public Health
Informatics
Methods
Clinical
• Logic
• Formal Grammars
• Evaluation
Ontology
Decision Making
Information Systems
• Database theory
Data Representation
• Decision Theory
Information Presentation
• Cognitive Analysis
Methods
• Process Models
(formal models)
Science
• Computer
Measurement
Theory
Statistics
Biomedical
Specialization
Core
Clinical
Evaluation
Imaging
BioInformatics Public Health
Decision Making
Data Representation
Methods
(formal models)
Computer Science
Information Systems
Information Presentation
Statistics
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Data Representation
Evaluation
Decision Making
Information Systems
Can analyze, develop, and apply
representations of biomedical
data
Data Representation
Information Presentation
• Representation and Coding of Medical Data
Methods
(formal models)
Computer Science
Statistics
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Information Systems
Can analyze,
develop,
and manage
Evaluation
Decision
Makingdeploy
Information
Systems
complex information systems
Data Representation
Information Presentation
• Health Information Systems Architecture
• Introduction to Information Management
Methods
(formal models)
Computer Science
Statistics
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Information Presentation
Evaluation
Can analyze,
develop,
Decision
Making
andInformation
deploy visual
Systems
presentations of biomedical information
Data Representation
Information Presentation
• User Interfaces in Medicine
• Understanding Information
Methods
(formal models)
Computer Science
Statistics
Biomedical
Specialization
Core
Clinical
Imaging BioInformatics
Decision
MakingPublic Health
Can analyze, develop, and apply formal models
of biomedical decision making
Making
Information
Systems
• Evaluation
QuantitativeDecision
Models
for Medical
Decision
Making and Clinical Support
Data Representation
Information Presentation
• Cognitive Sciences and Medical Informatics
• Social and Economic
Factors in Clinical
Methods
Statistics
Decision Making
(formal models)
Computer Science
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Evaluation
Can analyze, plan and carry out formal
evaluations
information
systems
Evaluation
Decisionof
Making
Information
Systems
• Evaluation
Methods in Medical
Informatics
Data Representation
Information
Presentation
• Design of Medical Experiments
• Introduction to Sociomedical Sciences
Methods
Statistics
Research Methods
(formal models)
Computer Science
Biomedical
Specialization
Core
Clinical
Evaluation
Imaging
BioInformatics Public Health
Decision Making
Data Representation
Methods
(formal models)
Computer Science
Information Systems
Information Presentation
Statistics
Biomedical
Specialization
Clinical
Imaging
BioInformatics Public Health
Clinical Application Domain
Core
• Economics of Informatics
Evaluation
Decision Making
Information Systems
• Project Management
Data Representation
Information Presentation
• Interactive Health Communications
• Introduction to Databases and Data Mining
Methods
(formal models)
Computer Science
Statistics
Biomedical
Specialization
Clinical
Imaging
BioInformatics Public Health
Imaging Application Domain
Core
• Biomedical Imaging
Evaluation
Decision Making
Information Systems
• Analysis and Quantification of Medical
Images
Data Representation
Information Presentation
• Wavelet Applications
Methods
• Computation Neural
Modeling and
(formal models)
Neuroengineering
Computer Science
Biomedical
Statistics
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Bioinformatics Application
Domain
Decision Making
• Evaluation
Intro to Genomics
Information Systems
• Computation
Genomics
Data Representation
Information Presentation
• Sequence Analysis
Methods
• Microarrays and
Regulatory Networks
Statistics
(formal models)
Science
• Computer
Biological
Database
Biomedical
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Public Health Application
Domain
Evaluation
Decision Making
Information Systems
• Use of Large Scale national health care data
Data Representation
Information Presentation
sets
• Hospital Organization and Management
Methods
• Health Communications
(formal models)
Computer Science
Statistics
Biomedical
Specialization
Core
Clinical
Evaluation
Imaging
BioInformatics Public Health
Decision Making
Data Representation
Methods
(formal models)
Computer Science
Information Systems
Information Presentation
Statistics
Biomedical
Applying Bioinformatics Knowledge
to Research Areas
Biomedical
Knowledge
Machine learning
Text interpretation
Knowledge engineering
Knowledge
Acquisition
Knowledge
Base
Model
Development
Information
Retrieval
Diagnosis
Biomedical
Data
Biomedical
Research
Planning &
Data Analysis
Data
Acquisition
Inferencing
System
Data
Base
Treatment
Planning
Human
Interface
Real-time acquisition
Imaging
Speech/language/text
Specialized input devices
Teaching
Image
Generation
Basic Research
Informatics
Challenges
Coding, data
structures, high
performance
computing
Vocabularies,
automated
retrieval from
repositories
Distributed medical
records, clinical
trials, teledentistry
Imaging
3-D modeling,
visualization, data
representation
Ontology-based
ref models and
classification
3-D anatomy
atlases,
radiological
diagnosis
Bioinformatics
Biochips, algorithms
for DNA sequencing,
patient specific drugs
Linking genomic
and patient data,
security, ethics
Genetic-based
patient records and
protocols
Databases,
searching, data
analysis theories and
algorithms
Integration and
validation of info,
knowledge
discovery
Data mining,
citizen-based
services
Clinical
Public Health
Applications
Specialization
Core
Clinical
Imaging
BioInformatics Public Health
Thanks to
Decision Making
Information Systems
Dr. Stephen
B. Johnson
Evaluation
Data Representation
Information Presentation
Dr. Ted Shortliffe
Methods
(formal models)
Computer Science
Statistics
Biomedical
Specialization
Core
Clinical
Evaluation
Imaging
BioInformatics Public Health
Decision Making
Data Representation
Methods
(formal models)
Computer Science
Information Systems
Information Presentation
Statistics
Biomedical