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EDWARD J. CARPENTER
Date: February 2013
Romberg Tiburon Center
San Francisco State University
3150 Paradise Drive
Tiburon CA 94920 USA
e mail: ecarpent@sfsu.edu
Tel. No.:(415)338-3732
FAX: (415)435 7121 or 7120
Education:
B.S.
M.S.
Ph.D.
State University of New York, College at Fredonia, Biology Major,1964
North Carolina State University, Zoology Major, 1966
North Carolina State University, Zoology Major, 1969
(Dissertation advisor: J.E. Hobbie)
Postdoctoral Fellow: Woods Hole Oceanographic Institution with R.R.L. Guillard
(1970-71)
Professional Experience:
Woods Hole Oceanographic Institution, 1970-1975 Associate Scientist
Marine Sciences Research Center, SUNY at Stony Brook, 1975-1985. Associate
Professor, 1985-2000, Professor
Associate Program Manager, Office of Polar Biology and Medicine, National Science
Foundation, 1995-1997.
SUNY at Stony Brook, Emeritus Professor 2000-present
Romberg Tiburon Center, San Francisco State University, 2000-present, Professor
Honors, Committees and Awards:
.
Elected Member At Large, American Society of Limnologists and Oceanographers,
1978-1981.
Representative from MSRC to SUNY Faculty Senate September 1978-1980.
American Men and Women of Science.
Member of Campus Equal Employment Opportunity Committee at SUSB, Stony Brook,
1982-1989, Head, 1985-1989.
Member of Executive Committee, Marine Sciences Research Center, SUNY, Stony
Brook 1983-1989 and 1994-1996.
Chairman, Scientific Review Committee, Marine Ecosystems Research Laboratory
(MERL), University of Rhode Island, 1984.
Member of National Research Council Minority Graduate Fellowship Evaluation Panel in
Biological Sciences, Biophysics and Biomedical Sciences 1986 and 1987.
Director of Undergraduate Studies, Marine Sciences Research Center, 1986-1990.
Head, URECA (Undergraduate Research and Creative Opportunities) program at the
MSRC, Stony Brook, 1986-1990.
Member President's (SUNY-Stony Brook) Affirmative Action Advisory Committee,
1986-2000.
Panel member, NSF JGOFS Equatorial Pacific Panel, October, 1990
Chief Organizer, NATO Advanced Research Workshop, "Biology and ecology of
Trichodesmium and other diazotrophic marine cyanobacteria." held in Bamberg, Germany
May 1991
Editorial Board, MICROBIAL ECOLOGY, January, 1991 for 3 yr term.
Sabbatical leave, Botany Institute, Stockholm University, Sweden, with B. Bergman,
1990-91.
Joint research program on Baltic Sea phytoplankton with scientists from the Institut fur
Meereskunde in Kiel, Germany in 1991 & 92, and from Inst. fur Ostseeforschung in
Warnemunde.
ICES Workshop on harmful phytoplankton growth rate measurement, Aveiro, Portugal,
July 1994
Invited participant, Swedish program on measurement of species specific growth rates of
dinoflagellates, Kristineberg Marine Laboratory, Sweden, September 1994.
NSF Science representative, McMurdo Base, Antarctica, January 1996 and 1997.
Invited Guest Researcher, Institut fur Ostseeforschung, Warnemuende, Germany, summer
of 1997.
Guest Investigator, Institute for Medical Psychology, Ludwig-Maximilians University,
Munich, Germany, summer of 1998 to study circadian clocks in cyanobacteria.
SCOPE Working Group on N2 fixation in the World’s Oceans, December 1998, NCEAS,
Santa Barbara CA
Sabbatical, February-August 1999, Botanical Institute, Stockholm University, Sweden
Short Course in Ecology of Cyanobacteria, Zanzibar, Tanzania, March 1999 sponsored by
STINT (Sweden)
NOAA Synthesis & Modeling Workshop on N2 fixation, Catalina Island, September 1999
Short Course in Cyanobacterial Symbioses, August 2000, European Science Foundation,
Galway, Ireland
Advisor to Staten Island Children’s Museum of Science, Spring, 2000
Emeritus Professor, SUNY, Stony Brook, 2000
Doctor of Philosophy, honoris causa, Stockholm University, Sweden, September 2001.
Elected to Editorial Board of “Journal of Phycology” in 2004 for 3 year term
Short Course in phytoplankton identification and molecular biological techniques,
Hawaii, September 2008, sponsored by C-MORE
Memberships
The Society of Sigma Xi
American Society of Limnology and Oceanography
The Phycological Society of America
American Association for the Advancement of Science
American Society of Microbiology
Research Grants:
1) WHOI-NSF Postdoctoral Fellow, 1970-71 $11,500, with R.R.L. Guillard.
Northeast Utilities Service Company, Principal Investigator
"Electric Power Plant
Entraimnent and Marine Organisms," $171,470, 1971-1973.
2) Northeast Utilities Service Company, Principal Investigator "Effects of Electric
Power Plant Entrainment," $162,078, 1973- 1975.
3) National Science Foundation, Principal Investigator "Nitrogen Fixation by Marine
Algae," $86,051, 1973-1975.
4) National Science Foundation, Principal Investigator (with J.J. McCarthy) "Nitrogen
Cycling in the Euphotic Zones of the Caribbean and Southern Sargasso Seas," $105,447,
1975-1979.
5) National Science Foundation, Co-Principal Investigator with B.L.
Bentley.
"Nitrogen fixation by the epiphyllae in a tropical rainforest." Starting date, November
1978, $66,971. Field work done in Costa Rica, duration 2 years.
6) National Science Foundation, Principal Investigator, (D. Capone is Co-P.I.) "Nitrogen
fixation and denitrification in eelgrass
beds," starting date March 1979, $93,000;
duration 2 years.
7) The Sea Grant Institute, Principal Investigator, (B.H. Brinkhuis and W.E. Esaias are
Co-P.I.'s). "Aspects of Nitrogen cycling in Great South Bay," starting date April 1979,
$75,000; duration 1 year.
8) The Sea Grant Institute, Principal Investigator (B.H. Brinkhuis and D. Capone,
Co-P.I.'s). Continuation of "Aspects of nitrogen cycling in Great South Bay," starting
April 1980, 39,000 duration 1 year.
9) Participant in NSF-JSPS joint US-Japanese grant to study marine Oscillatoria, C.
VanBaalen, P.I., University of Texas, starting date April 1980, $25,000 duration 2 years.
10) NOAA, Office of Marine Pollution Assessment, Principal Investigator. "Recovery
processes in a eutrophic estuary." October 1980, $172,304 duration 3 years.
11) The Sea Grant Institute, Principal Investigator "Great South Bay salt marsh nutrient
exchange." Starting date April 1981,$35,016, duration 1.5 years.
12) National Science Foundation, Co-Principal Investigator (with
D.G. Capone)
"Nitrogen fixation and denitrification in eelgrass
beds." starting date February 1982,
$121,830, duration 2 years
13) The Sea Grant Institute, Principal Investigator "Modeling of
nutrient-floral
relationships in Great South Bay," starting date June 1982, $34,028, duration 2 years.
14) The Sea Grant Institute, Investigator (H.H. Carter is P.I.) "Synthesis of the results of
the Great South Bay into a single volume ," start 1982, $25,000, duration 1 year.
15) The Sea Grant Institute, Principal Investigator "Gonyaulax tamarensis in Long Island
Waters," start June 1982, $8100, duration 1 year. The Suffolk County Department of
Health is contributing an additional $5000 in services to this research program.
16) National Science Foundation, Principal Investigator "Serotypic differentiation of
coccoid cyanobacteria by immunofluorescence. Start November 1982, $61,000, duration
2 years.
17) Suffolk County Legislature, Principal Investigator, "Occurrence of toxic red tide
algae in Suffolk County waters." Start October 1982, $54,000, duration 1 year.
18) The Sea Grant Institute, Principal Investigator, "Growth rate of
the toxic
dinoflagellate Gonyaulax tamarensis in a Long Island estuary." start January 1984
$17,958, duration 1 year.
19) National Science Foundation, Principal Investigator "Improvement of a microscope
spectrum analyzer for oceanographic research." $37,000. July, 1984.
20) The Oceanic Institute, Waimanalo, Hawaii, Principal Investigator. Support for two
graduate students to research Spirulina production. $14,000. Jan 1, 1985, duration 1 year
21) The Hudson River Foundation, Principal Investigator, "Nitrogen cycling in the lower
Hudson River estuary" $69,946, June 1, 1985, duration 1 year.
22) Suffolk County Health Department, supplement to "The occurrence of toxic red tide
algae in 23) Suffolk County marine waters. $35,000, January 1, 1986, duration 1 year.
24) Suffolk County Health Department "Investigations of the Great South Bay and
Peconic Bays Algal Bloom". Co-principal investigator with Drs. S. Sidall and W.
Dennison. $45,207. November 1985, duration 1 year.
25) National Science Foundation "Phytoplankton cell cycle/DNA analysis". Principal
investigator $60,491, start November 15, 1985, duration 1 year.
26) National Science Foundation "Validity of C an N2 fixation rate measurements in
marine Oscillatoria (Trichodesmium) Principal investigator $19,699, start November 15,
1985, duration 1 year. The Oceanic Institute, Waimanalo, Hawaii. Support for SUNY
graduate students Visscher and Chiaraviglio $14,000 start January 15, 1986, 1 year.
27) Suffolk County Department of Health Services. The occurrence of toxic "red tide"
algae in Suffolk County water. $35,000 start March,1986, 1 year.
28) Suffolk County Department of Health Services. Algae Bloom of
1985:
Identification, environmental requirements of the alga,
and possible cause of bloom
formation. $42,940 start March 1986, 1 year.
29) The Oceanic Institute, Waimanalo, Hawaii. Support for graduate student Pieter
Visscher. Feb. 1, 1987 $29,000, 2 years.
30) Suffolk County Department of Health Services. Toxic red tide algae in Suffolk
County marine waters. ($25,000). l year,1987
31) Living Marine Resources Institute (LIMRI) of the State of NY. "Recurrent Blooms
of Minute Phytoplankton in Long Island Coastal Waters." E.M. Cosper is PI, E.J.
Carpenter is Co-PI. $35,000, start June, l987, duration 1 year.
32) NYS Sea Grant. "Uptake and Depuration of red tide paralytic shellfish poisoning
toxins. in east coast bivalve molluscs." $171,218. PI is M. Bricelj. EJC is Assoc. Invest.
with D.M. Anderson. Start January 1, 1988.
33) NSF and NASA (co-funding) "Marine Oscillatoria (Trichodesmium): development
and use of algorithms for remote
sensing. E.J.Carpenter is PI, J. Rueter, G. Borstad
and J.
Gower are Co-PI's. $90,000 for one year. Start October 15,1988.
34) The Oceanic Institute, Waimanalo, Hawaii. Support for graduate
student Miguel
Oliazola. July 1, 1989. $14,000, 1 year.
35) National Science Foundation."Physiology, ecology and biochemistry of N2 fixation
by marine planktonic microorganisms"
August 1, 1987. $322,131, duration 3 years,
EJC is PI.
36) NATO, Advanced Research Workshop on the biology, physiology and
ecology of
marine cyanobacterial blooms, in particular by the tropical diazotroph Trichodesmium
and by Nodularia in the Baltic Sea. Carpenter is the PI, and the workshop held in
Bamberg, West Germany in May 1991. NATO awarded $34,000
for the ARW, NSF
Contributed $4000 for graduate student travel.
37) National Science Foundation "Growth rate & biological investigations of marine
phytoplankton using DNA-cell cycle analysis" EJC is PI. $164,912 for two years. Start
February 1, 1989.
38) ONR Growth rate and chemical influence on bioluminescent dinoflagellates"
$100,000 for two years. Start March 1, 1990.
39) National Science Foundation,"Upgrade of seagoing system for quantitative
microscopy" $15,000
($35,000 from NSF and $17,500 match from SUNY) for one year. Start April 1, 1990.
40) National Science Foundation, Biological Oceanography, "Physiology, ecology, and
biochemistry of N2 fixation by marine planktonic microorganisms." $337,710 for 3 yrs.
Start Sept 1, 1990. EJC was PI. Research is done in parallel with D. Capone of
Chesapeake Biological Lab.
41) National Science Foundation, "The use of immunocytochemical techniques for
phytoplankton growth rate estimation via cell cycle analysis." $399,986, 3 years, Start
March 1992. $170,400. EJC was PI, J. Chang is co-PI.
42)National Science Foundation "Physiology, ecology, and biochemistry of nitrogen
fixation by marine planktonic microorganisms." Start January 1994, $225,000 for 2 years
(termination October 1996). EJC was PI.
43) New England Biolabs, “Research on establishment of a marine national park in
Madagascar” Start 15 May, 1996 $7,000 for one year. EJC was co-PI with Patricia Wright
of Anthropology Department at SUNY Stony Brook.
44) New York Sea Grant, “Cell cycle technique for measurement of growth rates and
environmental effects of the brown tide alga”. Start 1 February, 1996 $84,139 for two
years. EJC was PI.
45) DAAD (Deutscher Akademischer Austausch Dienst) German exchange service
fellowship to work with chronobiologist Dr. Till Roenneberg, University of Munich,
during 1998-99. Three months support granted for living expenses for EJC.
46) REU (Research Experience for Undergraduates) supplement for $5000 to NSF
Trichodesmium grant for support of an undergraduate student for summer of 1998.
47) NSF “The use of immunocytochemical techniques for phytoplankton growth rate
estimation via cell cycle analysis.” Start May 1, 1996. Budget of $300,000 for 4 years.
EJC is PI
48) NSF “Nitrogen fixation as a source of new N in the tropical oceans.” E.J. Carpenter,
D.G. Capone, and J. Montoya, PI’s EJC awarded $380,000 for 4 years. Start 1 October
1996.
49)NSF (LEXEN initiative). “Biology and ecology of South Pole snow microbes” EJC is
PI, start October, 1997, $150,000 for 3 years. Research includes two trips to Antarctica..
50)SUNY-Stony Brook Research Foundation. Matching funds for scanning
spectrofluorometer. $15,000, spring 1999.
51)NASA (NSF-JGOFS associated, but all funding from NASA) Synthesis & Modeling
program “Modeling N2 and CO2 fixation by the oceanic diazotroph Trichodesmium”.
EJC is Co-PI budget $143,240 for 3 years. Start January 1, 1998.
52)NOAA “ECOHAB-Factors affecting growth of Pfiesteria piscicida”, S.E. Lin is PI,
EJC is Co-PI. $525,000 over 3.5 years, start date September 1,1998. (this grant taken to U
Connecticut with Dr. Lin October 1999, $25,000 remains at SUSB)
53)NSF Ocean Technology SGER Grant “Tricho-counter: development of an underway
system to determine concentrations of Trichodesmium.” $50,000. EJC is co-PI with D.G.
Capone and A. Subramaniam. Start spring 1999.
54) NASA “Validation of ocean color satellite data products in under-sampled marine
areas” EJC is co-PI with D.G. Capone (U. Maryland). A. Subramaniam is funded as a
postdoctoral investigator at U. Maryland. Grant renewed February 1999.
55)STINT Swedish Fellowship Program. “Marine nitrogen fixing cyanobacteria” B.
Bergman, Stockholm University is PI. EJC is participant and will exchange 2 US and 2
Swedish students between labs plus other joint research. Total annual award $1 million
Swedish Krona (ca $135,000). Start August 1997, 4 yr grant.
56) NASA Symbios: Varied waters and Dusty Skies: Validation of ocean color satellite
data products in under-sampled marine areas. PI is Ajit Subramaniam, Co-PI are D.G.
Capone and E.J. Carpenter. EJC’s 3 year proposed total is $50,396. Proposed start is Dec
1, 2000. Subcontract from University of Maryland
57) STINT (Swedish Government Grant) “Sandwich grant to support SFSU graduate
student Kendra Rutherford” $45,000. EJC and Birgitta Bergman, (Stockholm University)
are co-PIs. Start February 2002.
58) NSF, Major Research Instrumentation. R. Dugdale PI, EJC is co-PI. Acquisition of
isotope tracer instrumentation for the Romberg Tiburon Center. $244,709. Start August
2002.
59) CI-CORE, “Establishment of a Prototype Monitoring Station at the Rromberg
Tiburon Center for Environmental Studies” $494,223 Start Aug 1, 2002 for 1 year. S.
Bollens is PI, EJC is Co-PI.
60) NSF Biocomplexity Initiative: “Biocomplexity: Factors affecting, and impact of,
diazotrophic microorganisms in the western Equatorial Atlantic Ocean.” OCE 9981618,
$3,500,000 for 5 years. EJC is PI. Co-PI is D.G. Capone from USC. (EJC Budget is
$795,000 for 5 years). Start January 2000
61) NSF Biocomplexity Initiative: "Biocomplexity: Oceanic N2 fixation and global
climate." A.E. Michaels and D.G. Capone (from USC) are PIs. OCE 9981662, Carpenter
budget is total of $200,000 for 5 years. Start January 2000.
62) NSF “FSML: An environmental monitoring system for the Romberg Tiburon
Center”. $75,000 EJC is PI, co PIs Alissa Arp & Stephen Bollens, DBI 0121998, Start
Oct 1, 2001, for 5 years.
63) NSF, Biological Oceanography, Collaborative Research: Biology and phylogeny of
marine planktonic cyanobacterial symbioses. OCE 0132638, $178,334 for 3 years. EJC
is PI. Start Feb 26, 2002. Collaboration is with Jon Zehr at UC Santa Cruz.
64) CALFED, Integrated Regional Wetland Monitoring Pilot Project (IRWM). Start
1/1/03 for 3 years. $205,458. EJC is Co-PI, S. Bollens is PI.
65) NSF FSML Genetic data collection capability for the Romberg Tiburon Center,
SFSU. $121,605 start 11/13/04. C.S. Cohen is PI, EJC & A. Arp, W.P. Cochlan & F.P
Wilkerson are co-PI
66) CALFED Foodweb support for the threatened Delta Smelt and other estuarine fishes
in Suisun Bay and the western Sacramento-San Joaquin Delta. Budget with Dugdale &
Wilkerson is $360,323. 3/1/06 for 2.5 yrs. Wim Kimmerer is PI, EJC Co-PI.
67) NSF “MRI Program Acquisition of elemental analysis equipment for the Romberg
Tiburon Center” $120,957. 9/26/06 Tomoko Komada is PI, EJC is Co PI.
68) DAAD (Germany), RISE in North America Program. Support for Theresa Eichenlaub
for undergraduate research summer of 2010.
69) NSF “REU for Brandon Russell” $10250 for 1 year. EJC is PI. Starts spring 2010.
70) NSF “En-Gen: A functional genomic analysis of how a major calcifying
phytoplankter responds to ocean acidification predicted for the end of the century” EJC is
PI with Co-PIs Jonathan Stillman & Tomoko Komada $1,184,748 10/1/07 for 3 yrs.
71) NSF “ETBC: Amazon iNfluence on the Atlantic: CarbOn export from Nitrogen
fixation by DiAtomSymbioses (ANACONDAS) $351,355 for 3 yrs.
72) Collaborative Research: ETBC: Amazon iNfluence on the Atlantic: CarbOn export
from Nitrogen fixation by DiAtom Symbioses (ANACONDAS). $22,717 for one year
73) NSF “Collaborative Research: Biogeochemistry of cyanobacterial mats and hyporheic
zone microbes in McMurdo Dry Valley glacial melt water streams.” $452,178. EJC is PI
with Douglas Capone and Craig Cary.
CURRENT
Collaborative Research: Importance of heterotrophic and phototrophic N2 fixation in the
McMurdo Dry Valleys on local, regional, and landscape scales. $482,385 requested for
three years. EJC has 1 month summer salary. Start June 1, 2013.
Pending:
NSF “Ocean Acidification: Overcoming the species/strain barrier; picoplankton response
to multiple stressors arising from climate change. EJC requests 1 month summer salary.
$1,152,576 requested for 3 yrs.
NSF “Collaborative Research: Impact of Asian industrialization on aerosol effects on
North Pacific surface ocean chemistry and plankton dynamics” EJC requests one month
summer salary.$482,821 for 3 yrs.
NOAA Marine Debris proposal $111,000
Publications: Note: selected publications listed prior to 1980, all publications after 1980
are listed.
1971
Carpenter, E.J. and R.R.L. Guillard. Intraspecific differences in nitrate half-saturation
constants for three species of marine phytoplankton. Ecology 52:183-189.
1972
Carpenter, E.J., C.C. Remsen and B. Schroeder. Comparison of laboratory and in situ
estimates of urea decomposition
by a marine diatom. J. Exp. Mar. Biol. Ecol.
8:259-264.
Carpenter, E.J., C.C. Remsen and S. Watson. Utilization of urea by some marine
phytoplankters. Limnol. Oceanogr. 17:265-269.
Carpenter, E.J. K.L. Smith, Jr.
175:1240-1241.
Plastics on the Sargasso
Sea Surface.
Science
Carpenter, E.J., S.J. Anderson, G.R. Harvey, H.P. Miklas and B.B. Peck. Polystyrene
spherules in coastal waters. Science 178:749-750.
Carpenter, E.J., S.J. Anderson and B.B. Peck. Cooling
water chlorination and
productivity of entrained
phytoplankton. Marine Biology 16:37-40.
Remsen, C.C., E.J. Carpenter and B. Schroeder. Competition for urea among estuarine
microorganisms. Ecology 53:921- 926.
Carpenter, E.J. Nitrogen fixation by a blue-green epiphyte on pelagic Sargassum.
Science 178:1207-1208.
Carpenter, E.J. Nitrogen fixation by Oscillatoria (Trichodesmium) thiebautii in the
southwestern Sargasso Sea. Deep-Sea Res.. 20:285-288.
1973
Fisher, N.S., L.B. Graham, E.J. Carpenter and C. Wurster. Geographic differences in
phytoplankton sensitivity to PCB's. Nature (Lond.) 241:548-549.
Smith, K.L., K.A. Burns and E.J. Carpenter. Respiration of the pelagic Sargassum
community. Deep-Sea Res. 20:213- 217.
Carpenter, E.J., B.B. Peck and S.J. Anderson. Summary of entrainment research at the
Millstone Point nuclear power station. IN: L.D. Jensen (ed.) Proc. Sec. Entrain. Int.
Screen Workshp., Johns Hopkins Univ.:31-35.
1974
Remsen, C.C., E.J. Carpenter, and B.W. Schroeder. 1974. The role of urea in marine
microbial ecology. pp. 286-304 IN Effect of the ocean environment on microbial
activities. R.Morita and R. Calwell (eds.). Univ. Park Press, Baltimore, Md.
Fisher, N.S., E.J. Carpenter, C.C. Remsen and C.F.Wurster.
Effect of PCB on
interspecific competition in natural and gnotobiotic phytoplankton communities in
continuous and batch cultures. J. Microbial Ecol. 1:36-47.
Carpenter, E.J., B.B. Peck and S.J. Anderson. Survival of copepods passing through a
nuclear power station on northeastern Long Island Sound. Mar. Biol. 24:49-55.
Carpenter, E.J., S.J. Anderson and B.B. Peck. Copepod and chlorophyll a concentrations
in receiving waters of a nuclear power station and problems associated with their
measurement. Estuarine and Coastal Mar. Sci. 2:83-88.
Carpenter, E.J. and J.L. Cox. Production of pelagic Sargassum and a blue-green epiphyte
in the western Sargasso Sea. Limnol. Oceanogr. 19:429-436.
Goldman, J.C. and E.J. Carpenter. A kinetic approach to the effect of temperature on
algal growth. Limnol. Oceanogr. 19:756-766.
Gonye, E. and E.J. Carpenter. Production of iron binding
microorganisms. Limnol. Oceanogr. 19:84-843
compounds by marine
Guillard, R.R.L., E.J. Carpenter and B.E.F. Reiman. Skeletonema menzilii, a new diatom
from the western Atlantic Ocean. Phycologia 13:131-138.
Van Raalte, C.V., I. Valiela, E.J. Carpenter and J.M. Teal. Inhibition of nitrogen fixation
in salt marshes measured by acetylene reduction. Estuarine Coastal Mar. Sci.
2:191-206.
Van Raalte,C. V., W.C. Stewart, I. Valiela and E.J. Carpenter. A14C technique for
measuring algal productivity in salt marsh muds. Bot. Mar. 17:186-188.
1975
Head, W.D. and E.J. Carpenter. Codium fragile:
bacterium. Limnol. Oceanogr. 20:815-823.
nitrogen fixation by an attached
Carpenter, E.J. and J.L. Culliney. Nitrogen fixation in
187:551-552.
marine shipworms. Science
Carpenter, E.J. and J.J. McCarthy. Nitrogen fixation and uptake of combined
nitrogenous nutrients by Oscillatoria (Trichodesmium) thiebautii in the western Sargasso
Sea. Limnol. Oceanogr. 20:389-401.
1976
Brenner, D., I. Valiela, C.D. Van Raalte and E.J. Carpenter. Grazing by Talorchestia
longicornis on an algal mat in a New England salt marsh. J. Exp. Mar. biol. Ecol.
22:161-169.
Carpenter, E.J. and C.C. Price IV. Marine Oscillatoria (Trichodesmium): An
explanation for aerobic nitrogen fixation without heterocysts. Science 191:1278-1280.
Carpenter, E.J. Plastics, pelagic tar and other litter. Pages 77-89 IN: Marine Pollution
Monitoring, E.D. Goldberg (ed.) John Wiley & Sons, Inc., New York.
Wiebe, P.H., E.M. Hulbert, E.J. Carpenter, A.E. Jahn, G.P. Knapp III, S.H. Boyd and
P.B. Ortner. Gulf Stream cold core rings: Large scale interaction sites for open-ocean
planktonic communities. Deep-Sea Res. 23:697-710.
1977
Carpenter, E.J. and C.C. Price IV. Nitrogen fixation, distribution, and production of
Oscillatoria (Trichodesmium) in the northwestern Atlantic Ocean and Caribbean Sea.
Limnol. Oceanogr. 22:60-72.
Carpenter, E.J., G.R. Harbison, L. Madin, N. Swanberg, D. Biggs, E.M. Hulburt and J.J.
McCarthy. Rhizosolenia mats. Limnol. Oceanogr. 22:739-741.
Carpenter, E.J. and W.E. Esaias. Anoxia on the middle- Atlantic continental shelf:
98-102. Report of a workshop, Oct. 15-16, 1976, Washington, D.C., sponsored by
NSF/IDOE
1978
Carpenter, E.J., C.D. Van Raalte and I. Valiela. Nitrogen
Massachusetts salt marsh. Limnol. Oceanogr. 23:318-327.
fixation by algae in a
Carpenter, E.J. and J.J. McCarthy. Is benthic nutrient regeneration responsible for high
primary production on the continental shelf? Nature 274:188-189.
Valiela, I., S.B. Volkman, J.M. Teal, D. Shafer and E.J. Carpenter. Nutrient and
particulate fluxes in a salt marsh ecosystem: Tidal exchanges and inputs by precipitation
an groundwater. Limnol. Oceanogr. 23:789-812.
1979
Carpenter, E.J., W.J. Cretney, B.F. Morris and R.L. Swanson. Litter in the Marine
Environment, Pages 1-32 IN Ocean Pollution Research, Development and Monitoring
Needs, E.D. Goldberg (ed.). Report of a Workshop in Estes Park, Colorado, July 10-14,
1978.
Carpenter, E.J. and A.E. Walsby. Gas vacuole collapse in marine Oscillatoria
(Trichodesmium) thiebautii (Cyanophyta) and effect on nitrogenase activity and
photosynthesis. J. Phycol. 15:221-223.
McCarthy, J.J. and E.J. Carpenter. Oscillatoria (Trichodesmium) thiebautii (Cyanophyta)
in the central North Atlantic Ocean. J. Phycology 15:75-82.
Reuter, J.G., J.J. McCarthy and E.J. Carpenter. The toxic effect of copper on
Oscillatoria (Trichodesmium) thiebautii. Limnol. Oceanogr. 24:558-562.
1980
Capriulo, G. and E.J. Carpenter. Grazing by 35 to 202m microzooplankton in Long
Island Sound. Marine Biology 56:319-326.
Bentley, B.L. and E.J. Carpenter. The effects of desiccation and rehydration on nitrogen
fixation by epiphylls in a tropical rainforest. Microbial Ecology 6:109-113.
Prestwich, G., B.L. Bentley and E.J. Carpenter. Nitrogen fixation sources for neotropical
termites: selective foraging and fixation. Oecologia. 146:402-411.
Carpenter, E.J. and J.S. Lively. Review of estimates of algal growth using carbon-14
techniques. Pages 161-178 in Brookhaven Symposium 31. Primary Productivity in the
Sea. Ed. by P. Falkowski. Plenum Press.
Sarokin, D. and E.J. Carpenter. Cyanobacterial Spinae. Bot. Marina. 24:389-392.
1982
Capone, D.G. and E.J. Carpenter. Nitrogen fixation in the marine environment. Science
217: 1140-1142.
Capone, D.G. and E.J. Carpenter. Perfusion method for assaying microbial activities in
estuarine muds: applicability to studies of N2 fixation by C2H2 reduction Appl. Envir.
Microbiol. 43: 1400-1405.
Glibert, P., J.C. Goldman, and E.J. Carpenter. Seasonal variations in the utilization of
ammonium and nitrate by phytoplankton in Vineyard Sound, Massachusetts. Marine
Biology 70: 237-249.
Sarokin, D.J. and E.J. Carpenter.
Ultrastructure and taxonomy of the genus
Nannochloris. (Chlorophyceae). Botanica Marina. 25: 483-491.
1983
Carpenter, E. J. Physiology and ecology of marine Oscillatoria (Trichodesmium).
Marine Biology Letters. 4:69-85.
Capriulo, G.M. and E.J. Carpenter, Abundance, species composition and feeding impact
of tintinnid micro-zooplankton in central Long Island Sound. Marine Ecology Progress
Series.
10:277-288.
Lively, J.S., Z. Kaufman and E.J. Carpenter. Phytoplankton ecology of a barrier island
estuary: Great South Bay, New York. Estuarine and Coastal Mar. Sci. 16:51-69.
Campbell, L., E.J. Carpenter and V.J. Iacono. 1983. Identification and enumeration of
marine chroococcoid cyanobacteria by immunofluorescence Applied and Environmental
Microbiology. 46: 553-559.
Carpenter, E.J. 1983. Estimate of global marine nitrogen fixation by Oscillatoria
(Trichodesmium) IN E. J. Carpenter and D.G. Capone. Nitrogen in the Marine
Environment. Academic Press, New York, 920 pp.
McCarthy, J.J. and E.J. Carpenter. 1983. Nitrogen cycling in near surface waters of the
open ocean. IN E.J. Carpenter and D.G. Capone. Nitrogen in the Marine Environment.
Academic Press, New York, 920 pp.
1984
Kaufman, Z., J.S. Lively, and E.J. Carpenter. Uptake of nitrogenous nutrients by
phytoplankton in a barrier island estuary. Great South Bay, New York. Estuarine and
Coastal Marine Science 17:483-493.
Bentley, B.L. and E.J. Carpenter. Direct transfer of newly fixed nitrogen from free-living
epiphyllous microorganisms to their host plants. Oecologia. 63: 52-56.
Schrey, S.E., E.J. Carpenter and D.M. Anderson. The abundance and distribution of the
toxic dinoflagellate Gonyaulax tamarensis in Long Island estuaries.
Estuaries.
7:472-477.
1985
Carpenter, E.J. and S. Dunham.1985. Nitrogenous nutrient uptake, primary production
and species composition of phytoplankton in the Carmans River estuary, Long Island,
New York. Limnol. Oceanogr. 30: 513-526.
Chang, J. and E.J. Carpenter. Blooms of the dinoflagellate Gyrodinium aureolum in a
Long Island estuary: box model analysis of bloom maintenance. Marine Biology .. 89:
83-93.
1986
Park, Y.C., E.J. Carpenter and P.G. Falkowski. Ammonium excretion and glutamate
dehydrogenase activity of zooplankton in Great South Bay, New York. J. Plankton Res.
8:489-503.
Campbell, L. and E.J. Carpenter. Diel patterns of cell division in marine Synechococcus
(Cyanobacteria): The use of frequency of dividing cells equation to estimate specific
growth rates. Mar. Ecol. Prog. Ser. 32:139-148.
Campbell, L. and E.J. Carpenter. Estimating the grazing pressure of heterotrophic
nanoplankton on Synechococcus spp.
using the sea water dilution and selective
inhibitor techniques.Mar. Ecol. Prog. Ser. 33:121-129.
1987
Carpenter, E.J. Nutrients and Oxygen: too much of one and too little of the other. pp.
23-45 IN: V.R. Gibson and M.S. Connor (eds) Long Island Sound: Issues, Resources,
Status
and Management. NOAA Estuarine Programs Office.
Campbell, L. and E.J. Carpenter. Characterization of
phycoerythrin containing
Synechococcus spp. populations: seasonal and geographic distribution patterns.Jour.
Plankton Res. 9:1167-1181.
Scranton, M.I., P.C. Novelli, A. Michaels, S. Horrigan and E.J. Carpenter. Hydrogen
production and nitrogen fixation by Oscillatoria thiebautii during in situ incubations.
Limnol.Oceanogr 32:998-1006.
Carpenter, E.J., M.I. Scranton, P.C. Novelli and A. Michaels. Validity of N2 fixation rate
measurements in
marine Oscillatoria (Trichodesmium). J. Plankton Research.
9:1047-1056.
Cosper, E.M., W.C. Dennison, E.J. Carpenter, V.M. Bricelj, J.M. Mitchell, S.H.
Kuenster, D. Kolflesh, M. Dewey. Recurrent and persistent "Brown Tide" blooms
perturb coastal
marine ecosystem. Estuaries. 10: 284-290.
Park, Y.C. and E.J. Carpenter. Ammonium regeneration and
biomass of
macrozooplankton and ctenophores in Great South
Bay, NY. Estuaries 10:284-290.
1988
Carpenter, E.J. and J. Chang. Species specific growth rates via diel DNA synthesis
cycles. I. Concept of the method. Mar. Ecol. Prog. Ser. 43: 105-111
Chang, J. and E.J. Carpenter. Species specific growth rates via diel DNA Synthesis
Cycles. II. DNA Quantification and model verification in the dinoflagellate Heterocapsa
triquetra. Mar. Ecol. Prog. Ser. 44:287-296.
Carpenter, E.J. and L. Campbell. Diel patterns of cell division and growth rates of
Synechocystis spp. in Long Island Sound. Mar. Ecol. Prog. Ser. 47:179-183.
1989
Shapiro, L., E.M. Haugen, and E.J. Carpenter. Occurrence and abundance of
green-fluorescing dinoflagellates in surface waters of the northwest Atlantic and northeast
Pacific Oceans. J. Phycology 25:189-191.
Cosper, E.M., E.J. Carpenter and M. Cottrell. Primary productivity and growth dynamics
of the brown tide in Long Island embayments. pp 139-158, IN: E. Cosper, E.J.Carpenter
and M. Bricelj (eds).Novel phytoplankton blooms: causes and impacts of recurrent brown
tides and other unusual blooms. Springer Verlag.
Dzurica, S., C. Lee, E.M. Cosper and E.J. Carpenter. Role of environmental variables,
specifically organic and micronutrients in the growth of the chrysophyte. Aureococcus
anophagefferens pp 229-252, IN: E. Cosper, E.J. Carpenter, and M. Bricelj (eds). Novel
phytoplankton blooms: causes and impacts of recurrent brown tides and other unusual
blooms. Springer Verlag.
Cosper, E.M., W. Dennison, A. Milligan, E.J. Carpenter, C. Lee, J. Holzapfel, and L.
Milanese.
An examination of the environmental factors important to initiating and
sustaining "Brown Tide" blooms. pp.317-340. IN: E. Cosper, E.J. Carpenter, and M.
Bricelj (eds). Novel phytoplankton blooms: causes and impacts of recurrent brown tides
and other unusual blooms. Springer Verlag.
Villareal, T.A., and E.J. Carpenter. Nitrogen-fixation, suspension characteristics, and
chemical composition of Rhizosolenia mats in the central North Pacific gyre. Biol.
Oceanogr 6:327-345.
1990
Cosper, E.M., C. Lee, and E.J. Carpenter. Novel "brown tide" blooms in Long Island
embayments: a search for the causes. pp. 17-28. IN: E. Graneli, B. Sundstrom, L. Elder
and D. M. Anderson (eds). Toxic Marine Plankton. Elsevior, New York.
Antia, A.N., E.J. Carpenter, and J. Chang. Species-specific phytoplankton growth rates
via diel DNA synthesis cycles. III. Nutrient effects on growth rate measurement in the
dinoflagellate Prorocentrum minimum . Mar. Ecol. Prog. Ser. 63: 273-279.
Chang, J., and E,J. Carpenter. Species specific phytoplankton growth rates via diel DNA
synthesis cycles. IV. Evaluation of the magnitude of error with computer simulated cell
populations. Mar. Ecol. Prog. Ser. 65:293-304.
Carpenter, E.J., J. Chang, M. Cottrell, D. Capone, H. Paerl, and B. Bebout. Reevaluation
of nitrogenase oxygen protective mechanisms in the planktonic marine cyanobacterium
Trichodesmium . Mar. Ecol. Prog. Ser. 65:151-158.
Capone, D.G., J.M. O'Neil, J. Zehr and E.J. Carpenter. Basis for diel variation in
nitrogenase activity in the marine planktonic cyanobacterium Trichodesmium thiebauti.
Appl Envir. Microbiol. 56: 3532-3536.
Villareal, T.A. and E.J. Carpenter. Diel buoyancy regulation in the planktonic marine
cyanobacterium Trichodesmium thiebautii Limnol. Oceanogr. 35:1832-1837.
1991
Carpenter, E.J., J. Chang, and L. Shapiro. Blue and green fluorescing dinoflagellates in
Bahamian waters. Mar. Biol. 108:145-149.
Hawser, S.P., G.A. Codd, D.G. Capone and E.J. Carpenter. A neurotoxin from the
marine cyanobacterium Trichodesmium thiebautii . Toxicon. 29:277-278.
Bergman, B. and E.J. Carpenter. Nitrogenase confined to randomly distributed trichomes
in the marine cyanobacterium Trichodesmium thiebautii. J. Phycology 27:158-165.
Carpenter, E.J. and K. Romans. Major role of the Cyanobacterium Trichodesmium in
nutrient cycling in the North Atlantic Ocean. Science 254: 1356-1358.
Chang, J. and Carpenter, E.J. Species-specific phytoplankton growth rates via diel DNA
synthesis cycles. V. Application to natural populations in Long Island Sound. Marine
Ecology Progress Series. 78: 115-122.
1992
Siddiqui, P.J.A., E.J. Carpenter and B. Bergman. Trichodesmium: Ultrastructure and
Protein Localization. pp 9-28 In: E.J. Carpenter, D.G. Capone and J. Rueter (Eds)
"Marine
Pelagic Cyanobacteria: Trichodesmium and other Diazotrophs." Kluwer
Academic Publishers, Dordrecht, 357 pp.
Siddiqui, P., B. Bergman and E.J. Carpenter. Filamentous cyanobacterial associates of
the marine planktonic cyanobacterium Trichodesmium. Phycologia: 31:326-337.
Borstad, G.A., J.F.R. Gower and E.J. Carpenter, Development of algorithms for remote
sensing of marine Trichodesmium . pp. 193-210. In: E.J. Carpenter, D.G. Capone and J.
Rueter (Eds.) "Marine Pelagic Cyanobacteria: Trichodesmium and other Diazotrophs.
"Kluwer Academic Publishers, Dordrecht, 357pp.
Carpenter, E.J. and D.G. Capone. Significance of Trichodesmium blooms in the marine
nitrogen cycle. pp. 211-217. IN: Carpenter, E.J., D.G. Capone and J. Rueter (Eds.)
"Marine Pelagic Cyanobacteria:
Trichodesmium and other Diazotrophs."Kluwer
Academic Publishers, Dordrecht, 357pp.
Carpenter, E.J. Nitrogen fixation in the epiphyllae and root nodules of trees in the
lowland tropical rainforest of Costa Rica. Acta OEcologica. 13:153-160.
Siddiqui, P., B. Bergman, P-O. Bjorkman, and E.J. Carpenter. Ultrastructural and
chemical assessment of poly-B-hydroxybutyric acid in the marine cyanobacterium
Trichodesmium thiebautii. FEMS Microbiol. Lett., 94:143-148.
Carpenter, E.J., D.G. Capone, P. Siddiqui, E. Soderbeck and B. Bergman. Glutamine
synthetase activity and localization in colonies of the cyanobacterium Trichodesmium.
Appl. Envir. Microbiol., 58:3122-3129.
Siddiqui, P.J.A., B. Bergman and E.J. Carpenter. Immunolocalization of
phycobiliproteins and ribulose 1,5 bisphosphate carboxylase/oxygenase in the marine
cyanobacterium Trichodesmium thiebautii. J. Phycology, 28:320-327.
1993
Carpenter, E.J., P.J.A. Siddiqui, B. Bergman, J. O'Neil and D.G. Capone. The tropical
diazotrophic phytoplankter Trichodesmium: biological characteristics of two species.
Mar. Ecol. Prog. Ser.. 95:295-304.
Roenneberg, T. and E.J. Carpenter. Daily rhythm of O2 evolution in the cyanobacterium
Trichodesmium thiebautii under natural and constant conditions. Marine Biology
117:693-697.
Bergman, B., P.J.A. Siddiqui, E.J. Carpenter and G. Peschek. Cytochrome oxydase:
subcellular distribution and relation to nitrogenase derepression in the marine
cyanobacterium Trichodesmium thiebautii. Appl. Envir. Microbiol.. 59:3239-3244.
Ben-Porath, J., E.J. Carpenter, and J. Zehr. Genotypic relationships in the genus
Trichodesmium based on nifH sequence comparisons. Appl. Envir. Microbiol.
29:806-810
1994
Villareal, T.A., and E.J. Carpenter. Chemical composition
and photosynthetic
characteristics of Ethmodiscus rex (Bacillariophyceae): Evidence for vertical migration. J.
Phycology 30:1-8.
Chang, J. and E.J. Carpenter. Inclusion bodies in several species of Ceratium Schrank
(Dinophyceae) from the Caribbean
Sea examined with DNA-specific staining. J.
Plankton Res.16:197-203.
Subramanian, A. and E.J. Carpenter. An empirically derived protocol for the detection of
blooms of the marine cyanobacterium Trichodesmium using CZCS imagery. Int. J.
Remote Sensing. 15:1559-1569.
Lin, Senjie, Jeng Chang, and E.J. Carpenter. Detection of proliferating cell nuclear
antigen homolog in four species of marine phytoplankton. J. Phycol. 30:449-456.
Chang, J. and E.J. Carpenter. Active growth of an oceanic dinoflagellate, Ceratium teres
(DINOPHYCEAE), in the Caribbean and Sargasso Seas estimated by cell cycle analysis.
J. Phycol. 30:449-456.
Janson, S., E.J. Carpenter and B. Bergman. Fine structure and localization of
photosynthetic proteins in Aphanizomenon from the Baltic Sea. European J. Phycology
29:203-211.
Janson, S., E.J. Carpenter and B. Bergman. Compartmentalization of nitrogenase in a
non-heterocystous cyanobacterium: Trichodesmium contortum. FEMS Microbiology
Letters 118:9-14.
Romans, K.M., E.J. Carpenter and B. Bergman. Buoyancy regulation in the colonial
diazotrophic cyanobacterium Trichodesmium tenuae: ultrastructure and storage of
carbohydrate phosphate and nitrogen. J. Phycology. 30:935-942.
Bergman, B., E.J. Carpenter, S. Janson, G. Sroga, and C. Fredriksson. Nitrogenase in the
marine non-heterocystous cyanobacterium Trichodesmium a review. pp 85-92 IN:
Hegazi, N.A., M. Fayes, and M. Monib (eds.) Proc. Sixth Intl. Symp. on Nitrogen
Fixation in Non-legumes. The American University in Cairo Press, Cairo.
Capone, D.G., M. D. Farrier and E.J. Carpenter. Amino acid cycling in colonies of the
planktonic marine cyanobacterium Trichodesmium thiebautii. Appl. Environ. Microbiol.
60:3989-3995
1995
Carpenter, E.J.,S. Janson, R. Boje, F. Pollehne and J. Chang. Dinophysis norvegica: role
of a dinoflagellate in primary production in the Baltic Sea. European J. Phycol. 30: 1-9.
Carpenter, E.J., and T. Roenneberg. The marine planktonic cyanobacterium
Trichodesmium spp. photosynthetic rate measurements in the SW Atlantic Ocean. Mar.
Ecol. Prog. Ser.118:267-273.
Janson, S., E.J. Carpenter and B. Bergman. Immunolabelling of phycoerythrin, ribulose
1,5-bisphosphate carboxylase/oxygenase and nitrogenase in the unicellular cyanobionts of
Ornithocercus spp. (Dinophyceae). Phycologica 34:171-176.
Lin, S., J. Chang and E.J. Carpenter. Growth characteristics of phytoplankton determined
by cell cycle proteins. I. PCNA immunostaining on Dunaliella tertiolecta
(Chlorophyceae). J. Phycology. 31:388-395.
Janson, S., P.J.A. Siddiqui, A.E. Walsby, K.M. Romans, E. J. Carpenter and B. Bergman.
Cytomorphological characterization of Trichodesmium species (Cyanophyta) from the
Caribbean Sea, Sargasso Sea, and the Indian Ocean. J. Phycol. 31:463-477.
Bothwell, M.L., D. Karentz, and E.J. Carpenter. No UVB effect? Nature 374:601 (letter
to editor).
Lin, S. and E.J. Carpenter. Growth characteristics of marine phytoplankton determined by
cell cycle proteins: the cell cycle of a giant diatom Ethmodiscus rex (Bacillariophyceae)
in the SW North Atlantic Ocean and Caribbean Sea. J. Phycol. 31: 778-785.
1996
Carpenter, E.J. and W.W. Carmichael. Taxonomy of harmful marine cyanobacteria. IN:
G.M. Hallegraeff, D. Anderson, A. Cembella (eds.) UNESCO-IOC Manual on Harmful
Marine Phytoplankton. pp. 375-382.
Lin, S. and E. J. Carpenter. An empirical protocol of immunofluorescence for marine
phytoplankton. J. Phycology 32:1083-1094.
Lin, S., E.J. Carpenter and J. Chang. Detection of p34cdc2 and cyclin B like proteins in
Dunaliella tertiolecta. Marine Biology, 125:603-610.
1997
Carpenter, E.J., D.G. Capone, B. Fry and H. R. Harvey. Biogeochemical tracers of the
marine cyanobacterium Trichodesmium. Deep-Sea Research 44, 27-38.
Lin, S. and E.J. Carpenter. RUBISCO of Dunaliella tertiolecta is redistributed between
the pyrenoid and the stroma as a light-shade response. Marine Biology 127:521-529.
Lin, S. and E.J. Carpenter. Pyrenoid localization in relation to the cell cycle and growth
phase of Dunaliella tertiolecta (Chlorophyceae). Phycologica 36:24-31.
Capone, D.G., J.P. Zehr, H.W. Paerl, B. Bergman, and E.J. Carpenter. Trichodesmium: A
globally significant marine cyanobacterium. Science. 276:1221-1229.
Lin, S, J. Chang and E.J. Carpenter. Can a non-terminal event of the cell cycle be used for
estimating species-specific growth rates of phytoplankton? Marine Ecology Progress
Series. 151:283-290.
1998
Carpenter, E.J., J Chang, and S. Lin. Phytoplankton growth studies by cell cycle analysis.
pp 227-245. IN: K.E. Cooksey (ed.) “Some molecular approaches to the study of the
ocean”. Chapman & Hall.
Lin, S., S. Henze, P. Lundgren, B. Bergman and E.J. Carpenter. Whole cell
immunolocalization of nitrogenase in the marine diazotrophic cyanobacterium
Trichodesmium. Appl. Envir. Microbiology 64:3052-3058.
Capone, D.G., Ajit Subramaniam, J.P. Montoya, M. Voss, C. Humborg, A.M. Johansen,
R.L. Siefert and E.J. Carpenter. An extensive bloom of the N2-fixing cyanobacteriun
Trichodesmium erythraeum in the central Arabian Sea. Marine Ecology Progress Series.
172:281-292.
Lin, S. and E.J. Carpenter. Identification and preliminary characterization of PCNA gene
in the marine phytoplankton Dunaliella tertiolecta and Isochrysis galbana. Molecular
Marine Biology and Biotechnology 7:62-71.
1999
Subramaniam, A., E.J. Carpenter, D. Karentz and P.G. Falkowski. Optical properties of
the marine diazotrophic cyanobacterium Trichodesmium; I. Absorption and spectral
photosynthetic characteristics. Limnology and Oceanography 44:608-617.
Subramaniam, A., E.J. Carpenter, and P.G. Falkowski. Optical properties of the marine
diazotrophic cyanobacterium Trichodesmium; II A reflectance model for remote sensing.
Limnology and Oceanography 44:618-627.
Carpenter, E.J., J. Montoya, J. Burns, M. Mulholland, A. Subramaniam and D.G. Capone.
Extensive bloom of N2 fixing symbiotic association in the tropical Atlantic Ocean.
Marine Ecology Progress Series. 185:273-283.
Janson, S., E.J. Carpenter, B. Bergman, S.J. Giovannoni, and K. Vergin. Genetic analysis
of natural populations of the marine diazotrophic cyanobacterium Trichodesmium. FEMS
Microbiol. Ecol. 30:57-65.
Lin, S., and E.J. Carpenter. A PSTTLRE-form of cdc2-like gene in the marine microalga
Dunaliella tertiolecta. Gene 239:39-48.
Janson, S., J. Wouters, B. Bergman and E.J. Carpenter. Genetic diversity of extra- and
intracellular diatom symbionts belonging to the filamentous heterocystous cyanobacterial
genus Richelia. Environmental Microbiology 1:431-438.
Capone, D.G., and E.J. Carpenter. Nitrogen fixation by marine cyanobacteria: historical
and global perspectives, pp 235-256. L. Charpy & A.W.D. Larkum (eds.) Proceedings of
Symposium on Marine Cyanobacteria, Paris, France, November 1997, Bull Inst.
Oceanogr. Monaco # 19.
Lin, S., and E.J. Carpenter. Molecular Ecology of Marine Phytoplankton: A practical
procedure. IN: Xu, H. & Colwell, R.R. (eds) Proceedings of the International Symposium
of Progress and Prospects of Marine Biotechnology 1998. Ocean Press, China 255-268.
2000
Dupuoy, C., J. Neveux, A. Subramaniam, M.R. Mulholland, J.P. Montoya, L. Campbell,
D.G. Capone & E.J. Carpenter. SeaWiFS captures a persistent bloom in the southwest
tropical Pacific Ocean: a link to Trichodesmium. EOS 81:14-16.
Zehr, J., E.J. Carpenter, and T. Villareal. New perspectives on nitrogen fixation in the
open ocean: evidence for new sources of fixed nitrogen in the marine environment.
Trends in Microbiology 8:68-73.
Carpenter, E.J. and S. Janson. Intracellular symbionts in the marine diatom Climacodium
frauenfeldianum Grunow. J. Phycology 36:540-544.
Carpenter, E.J., S. Lin, and D.G. Capone. 2000. Bacterial activity in South Pole snow.
Applied & Environmental Microbiology. 66:4514-4517.
Lin, S., E. Magaletti, and E.J. Carpenter. Molecular cloning and antiserum development
of cyclin box in the brown tide alga Aureococcus anophagefferens. Molecular
Biotechnology 2, 577-586.
2001
Sañudo-Wilhelmy, S.A., A. Kustka, D.G. Capone, D. Hutchins, C. Gobler, M. Yang, &
E.J. Carpenter. Phosphorus limitation of N2 fixation in the central Atlantic Ocean.
Nature, 411:66-69.
Carpenter, E.J., and S. Janson. Anabaena gerdii (sp. nov.), a new heterocystous,
filamentous cyanobacterium from the South Pacific Ocean and Arabian Sea. Phycologia.
40:105-110.
Lin, S., C.J. Gobler, and E.J. Carpenter. Cytological and biochemical responses of
Dunaliella tertiolecta (Volvocales, Chlorophyta) to iron stress. Phycologia. 40:403-410.
Lundgren, P., E. Soderbak,
B. Bergman, and E.J. Carpenter. Katagnymene.:
characterization of a novel marine diazotroph. J. Phycology 37:1001-1009.
Subramaniam, A., C.W. Brown, R.R. Hood, E.J. Carpenter and D.G. Capone. Detecting
Trichodesmium blooms in SeaWiFS imagery. Deep-Sea Res. II 49:107-121.
2002
Hood, R. A. Subramaniam, L. May, E.J. Carpenter and D.G. Capone. Remote estimation
of nitrogen fixation by Trichodesmium. Deep-Sea Res. II 49/1-3:123-147.
Mulholland, M., S. Floge, E.J. Carpenter and D.G. Capone. Phosphorus dynamics in
cultures and natural populations of Trichodesmium spp. Marine Ecology Progress Series.
239:45-55.
Karl, D., A. Michaels, B. Bergman, D. Capone, E.J. Carpenter, R. Letelier, F. Lipschultz,
H. Paerl, D. Sigman, & L. Stal. Nitrogen Fixation in the world’s oceans.
Biogeochemistry. 57/58:47-98
Carpenter, E.J. and R. Foster. Marine Cyanobacterial Symbioses. IN: A.N. Rai, B.
Bergman and U. Rasmussen`(eds). Pp. 11-17, IN: Cyanobacteria in Symbiosis. Kluwer
Academic Publishers.
Carpenter, E.J. Marine Cyanobacterial Symbioses. Biology and Environment,
Proceedings of the Irish Royal Academy. 102B: 15-18.
Kustka, A., E.J. Carpenter & S. Sanudo-Wilhelmy. Iron and marine nitrogen fixation:
progress and future directions. Research in Microbiology, 153:255-262.
Falcón, L. A. Chistocerdov, F. Cipriano & E.J. Carpenter. Nitrogen fixation by
picoplanktonic cyanobacteria in the tropical North Atlantic Ocean. Applied &
Environmental Microbiology. 68:5760-5764.
Montoya, J. E.J. Carpenter and D.G. Capone. Nitrogen fixation and nitrogen isotope
abundance in zooplankton of the oligotrophic North Atlantic Ocean. Limnology and
Oceanography 47:1617-1628.
2003
Villareal, T. and E.J. Carpenter. Buoyancy regulation and potential for vertical migration
in the oceanic cyanobacterium Trichodesmium. Microbial Ecology. 45:1-10.
Kustka, A., S.A. Sanudo-Wilhelmy, D.G. Capone, J.A. Raven, E.J. Carpenter. A revised
estimate of the iron use efficiency of nitrogen fixation, with special reference to the
marine N2 fixing cyanobacterium, Trichodesmium spp. J. Phycology 39:12-25.
Lin, S., T.A. Feinstein, Huan Zhang, and E.J. Carpenter. Development of an
immunofluorescence technique for detecting Pfiesteria piscicida. Harmful Algae 2:223231.
Kustka, A., S. Sañudo-Wilhelmy, E.J. Carpenter, D.G. Capone, J. Burns & W.G. Sunda.
Iron requirements for dinitrogen and ammonium supported growth in cultures of
Trichodesmium (IMS 101): comparison with nitrogen fixation rates and iron:carbon ratios
of field populations. Limnol. Oceanogr. 48:1869-1884
Cronberg, G., E.J. Carpenter, and W.W. Carmichael. Taxonomy of harmful
cyanobacteria. pp. 523-562, IN: G.M. Hallegraeff, D.M. Anderson, and A.D. Cembella
(eds) Manual on Harmful Microalgae UNESCO Intergovernmental Oceanographic
Commission.
2004
Carpenter, E.J., A. Subramaniam & D.G. Capone. Biomass and primary productivity of
the cyanobacterium Trichodesmium spp. in the tropical N Atlantic Ocean. Deep-Sea-Res.
I 51:173-203.
Falcón, L., E.J. Carpenter, F. Cipriano, B. Bergman & D.G. Capone. N2 fixation by
unicellular Bacterioplankton from the Atlantic and Pacific Oceans: Phylogeny and in situ
rates. Appl. Envir. Microbiol 70:765-770.
Hewson, I., S.R. Govil, D.G. Capone, E.J. Carpenter, & J.A. Fuhrman. Evidence of
Trichodesmium viral lysis and potential significance for biogeochemical cycling in the
oligotrophic ocean. Aquatic Microbial Ecology. 36:1-8
Sañudo-Wilhelmy, S., A. Tovar-Sanchez, F. Fu, D.G. Capone, E.J. Carpenter, & D.A.
Hutchins. The impact of surface adsorbed phosphorus on phytoplankton Redfield
stoichiometry. Nature 432: 897-901.
Lin, S., M.R. Mulholland, H. Zang, T.N. Feinstein, F.J. Jochem & E.J. Carpenter. Intense
grazing and prey-dependent growth of Pfiesteria piscicida (Dinophyceae). J. Phycology
40:1062-1073.
Falcón, L., S. Lindvall, K. Bauer, B. Bergman & E.J. Carpenter. Ultrastructure of
unicellular N2 fixing cyanobacteria from the tropical North Atlantic Ocean and
subtropical North Pacific Oceans. J. Phycol. 40:1074-1078.
2005
Capone, D.G., J.A. Burns, C. Mahaffey, A.F. Michaels, J.P. Montoya, A. Subramaniam
& E.J. Carpenter. Nitrogen fixation by Trichodesmium spp.: An important source of new
nitrogen to the tropical North Atlantic Ocean. Global Biogeochem. Cycles, 19, p 1029.
Falcón, L., S. Pluvinage & E.J. Carpenter. Growth kinetics of marine unicellular N2
fixing cyanobacterial isolates in continuous culture in relation to phosphorus and
temperature. Mar. Ecol. Prog. Ser. 285: 3-9.
Campbell, L. E.J. Carpenter, J.P. Montoya, A.B. Kustka, & D.G. Capone. 2005.
Picoplankton community structure within and outside a Trichodesmium bloom in the
southwestern Pacific Ocean. Vie et Milieu. 55:185-195.
2006
Shipe, R.F., J. Curatz, A. Subramaniam, E.J. Carpenter, & D.G. Capone. Diatom
biomass and productivity in oceanic and plume-influenced waters of the western tropical
Atlantic Ocean. Deep-Sea Res. I. 53:1320-1334.
Foster, R.A., E.J. Carpenter & B. Bergman. Unicellular cyanobionts in open ocean
dinoflagellates, radiolarians and tintinnids: ultrastructural characterization and immunolocalization of nitrogenase and phycoerythrin. J. Phycol. 42:453-463
Foster, R.A., J.L. Collier & E.J. Carpenter. Reverse transcription-PCR amplification of
cyanobacterial symbiont 16S rRNA sequences from single non-photosynthetic eukaryotic
marine planktonic host cells. J. Phycol. 42:243-250.
2007
Foster, R.A., D.G. Capone, E.J. Carpenter, C. Mahaffey, A. Subramaniam, & J.P. Zehr.
Influence of the Amazon River plume on free-living and symbiotic cyanobacteria in the
Western Tropical North Atlantic Ocean. Limnol. & Oceanogr 52:517-532.
Eberl, R. & E.J. Carpenter.
Macrosetella gracilis (Harpacticoida) uses the
cyanobacterium Trichodesmium spp. as a floating substrate but not as a major food
source. Marine Ecology Progress Series 333:205-212.
Shipe, R. F., E.J. Carpenter S. Govil, and D.G. Capone. Limitation of phytoplankton
production by Si and N in the western Atlantic Ocean. Mar. Ecol. Prog. Ser. 338:33-45
Eberl, R., S. Cohen, F. Cipriano & E.J. Carpenter. Genetic diversity of the pelagic
copepod Macrosetella gracilis on colonies of the cyanobacterium Trichodesmium
Aquatic Biology 1, 1: 33-43.
2008
Subramaniam, A., E.J. Carpenter, S. Cooley, R. Del Veccio, C. Mahaffey, S. SañudoWilhelmey, R. Shipe, A. Tovar-Sanchez, P.L. Yaeger, & D.G. Capone. Amazon River
amplifies C and N cycles in the tropical North Atlantic Ocean. Proc. Nat. Acad. Sci.
105:10460-10465.
Carpenter, E.J. & D.G. Capone. Nitrogen fixation in the marine environment. IN:
Nitrogen in the Marine Environment. Edited by: M. Mulholland, D. Bronk, D. Capone &
E.J. Carpenter. Elsevier Press.
2009
Lin, S., , G. Sandh, H. Zhang , J. Cheng, K. Perkins, E.J. Carpenter & B. Bergman. Two
flavodoxin genes in Trichodesmium (Oscillatoriales, Cyanophyta): Remarkable sequence
divergence and possible functional diversification. J. Exp. Mar. Biol. & Ecol. 371:93101.
Cohen, R., K. Walker, & E.J. Carpenter. Polysaccharide addition effects on rhizosphere
nitrogen fixation rates and growth of the California Cordgrass Spartina foliosa. Wetlands
29 (3):1063-1069
2010
Drake, J., E.J. Carpenter, M. Cousins, K.L. Nelson, A. Guido-Zarate, & K. Loftin. Effects
of light and nutrients on seasonal phytoplankton succession in a temperate eutrophic
coastal lagoon. Hydrobiologia 654 #1177-192.
2011
Sohm, J.A.,, A. Subramaniam, T. Gunderson, E. J. Carpenter & D. G. Capone. Nitrogen
fixation by Trichodesmium and unicellular diazotrophs in the north Pacific subtropical
gyre. Journal of Geophysical Research 116: 1-12
S. Lefebvre, I. Benner, M. Drake, P. Rossignol, K. Okimura, T. Komada, J. Stillman &
E.J. Carpenter. Nitrogen source and pCO2 synergistically affect carbon allocation, growth
and morphology of the coccolithophore Emiliania huxleyi. Global Change Biology
(published online) doi 10.1111/j. 1365-2486.2011
2012
Yeung, L.Y., W.M. Berelson, E.D. Young, M.G. Prokopenko, V.J. Coles, J.M. Montoya,
E.J. Carpenter & P.L. Yager. 2012. Impact of diatom-diazotroph associations on carbon
export in the Amazon River plume. Geophysical Research Letters. 39: LI8609,
doi:10.1029/2012GLO53356, 2012
Niederberger, T.D., J.A. Sohm, J. Tirindelli, T. Gunderson, D.G. Capone, E.J. Carpenter
& S. Craig Cary. Diverse and highly active diazotrophic assemblages inhabit ephemerally
wetted soils of the Antarctic Dry Valleys. FEMS Microbiology Ecology doi:
10.1111/j.1574-6941.2012.01390
Luo, Y.-W., S.C. Downey, S. Bonnet, D. Bottjer, D.G. Capone, E.J. Carpenter, M.J.
Church, L.I. Falcon, R.A. Foster, K. Furya, S. Kitajima, R.M. Letelier, P. H. Moisander,
C.M. Moore, J.A. Needoba, K.M. Orcutt, A.J. Poulton, P. Raimbault, A.P. Rees, T.
Shiozaki, A. Subramaniam, T. Tyrrell, K.A. Turk, A. E. White, J.P. Zehr. Database of
diazotrophs in Global Ocean: Abundances, Biomass and nitrogen fixation rates. Earth
System Science Data. 4:47-73 doi:10.5194 essd-4-47-2012
Bergman, B., G. Sandh, S. Lin, J. Larsson, & E.J. Carpenter. Trichodesmium, a
widespread marine cyanobacterium with unusual nitrogen fixation characteristics. FEMS
Micro Rev. doi: 10.1111/j.1574-6976.2012.00352.x.
Kimmerer, W. J., A.E. Parker, U.E. Lidstrom, & E.J. Carpenter Short-term and
interannual variability in primary production in the low-salinity zone of the San Francisco
Estuary. Estuaries and Coasts. 35:913-929.
2013
Benner, I., R.E. Diner, S. Lefebvre, D. Li, T. Komada, E.J. Carpenter, & J.H. Stillman.
Warm and acidified conditions cause increased calcification but not shifts in expression
of known calcification genes under long term culture of the coccolithophore Emiliania
huxleyi. Phil. Trans. Royal. Soc. B. vol 368 doi: 10.1098/rstb.2013.0049
In Press
Goes, J. I., H. do Rosario Gomes, A. Chekalyuk, E.J. Carpenter, J.P. Mpntoya, V. Coles,
P.L. Yager, R. Foster, M. Hafez. Influence of the Amazon River discharge on the
biogeography of phytoplankton communities in the western tropical north Atlantic.
Progress in Oceanography
Pending:
Medeiros, P.M., N.D. Ward, E.J. Carpenter, H. R. Gomes, J. Niggemann, P.L. Yager,
A.V. Krusche, M. Seidel & T. Dittmar. Dilution and alteration of dissolved organic
matter along the Amazon River to Ocean Continuum. Nature Geosciences.
Lidstrom, U.E., A.E. Parker, E.J. Carpenter & W.J. Kimmerer. Phytoplankton species
composition and biomass in the low-salinity zone of the San Francisco Estuary.
Hydrobiologia
Falcon, L.I., B. Diaz, B. B. Bergman, & E.J. Carpenter. Preliminary approach to bacterial
assemblage analysis inside and outside the Amazon River plume. Microb. Ecol.
Cohen, R.A., A.E. Parker, & E.J. Carpenter. Phytoplankton responses to salinity influence
estuarine foodweb pathways. Estuaries and Coasts.
Loick-Wilde, N., E.J. Carpenter, B.J. Conroy, M. Gehre, J. Goes, A. Miltner, D.K.
Steinberg, & J. P. Montoya. Function of nitrogen in food webs: insights from amino acid
nitrogen stoichiometry. Ecology
Cohen, R.A., F.P. Wilkerson, & E.J. Carpenter. Primary production and nutrient
availability in wetlands of the northern San Francisco Estuary. Wetlands Ecology and
Management.
Murphy, J.L., K. E. Boyer, & E.J. Carpenter. Restoration of cordgrass salt marshes:
Fertilization for stimulation of nitrogen fixation and primary production.
Liu, S., S. Hu, Z. Guo, T. Li, E.J. Carpenter, & S. Lin. Detecting in situ diet diversity in
copepods using molecular technique: development of a copepod-excluding eukaryote-
inclusive protocol. Limnology and Oceanography Methods
In Preparation
Douglas G. Capone, Joe P. Montoya, Ajit Subramaniam, Jay A. Burns, Adam Kustka,
Margie R. Mulholland, Miles Furnas, and Edward J. Carpenter. Nitrogen Fixation in
Coastal Waters of Northern Australia.
Lin, S, S. Liu, H. Zang, C.-Y. Kuo, & E.J. Carpenter. Molecular analysis reveals a highly
diverse and selective diet in the estuarine copepod Acartia tonsa in the natural
environment.