Title: Evolution of dosage compensation in Anolis carolinensis, a
... the autosomes because of their unique inheritance patterns (Meisel and Connallon 2013). In species with XX/XY sex determination, females have two copies of the X chromosome, which means that, similar to the autosomes, deleterious recessive genes can be shielded from selection by dominant alleles in ...
... the autosomes because of their unique inheritance patterns (Meisel and Connallon 2013). In species with XX/XY sex determination, females have two copies of the X chromosome, which means that, similar to the autosomes, deleterious recessive genes can be shielded from selection by dominant alleles in ...
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... The map obtained by recombination frequency analysis does not place the gene loci at specific places on the chromosome; it simply allows us to determine the positions of genes relative to one another (linkage groups). The small cluster of three genes could in theory be anywhere on the actual chromos ...
... The map obtained by recombination frequency analysis does not place the gene loci at specific places on the chromosome; it simply allows us to determine the positions of genes relative to one another (linkage groups). The small cluster of three genes could in theory be anywhere on the actual chromos ...
Plant LTR-retrotransposons and MITEs: control of
... Arabidopsis thaliana retrotransposons represent only the 4 –8% of the genome, in large genomes like maize they can account for more than 50– 80% of their DNA content (Kumar and Bennetzen, 1999). The copy number of retrotransposons increases with their activity due to their replicative mechanism of t ...
... Arabidopsis thaliana retrotransposons represent only the 4 –8% of the genome, in large genomes like maize they can account for more than 50– 80% of their DNA content (Kumar and Bennetzen, 1999). The copy number of retrotransposons increases with their activity due to their replicative mechanism of t ...
TNFα signals through specialized factories where responsive coding
... 3. I am confused about the numbers shown for contacts in Fig. 2B. The library data, if I understand the approach correctly, is based on sequencing just ~80 clones and produces something like 30 "contacts". The high throughput sequencing approach in contrast has millions of reads, yet produces only a ...
... 3. I am confused about the numbers shown for contacts in Fig. 2B. The library data, if I understand the approach correctly, is based on sequencing just ~80 clones and produces something like 30 "contacts". The high throughput sequencing approach in contrast has millions of reads, yet produces only a ...
Birth of fertile bimaternal offspring following
... with more than 1 FPKM were shown. The red and blue points represent imprinted genes expressed from maternal and paternal alleles, respectively. Dashed lines depict 2-fold changes. The R2 was determined by Pearson’s correlation. (D) Five imprinted genes with more than 2-fold changes in expression lev ...
... with more than 1 FPKM were shown. The red and blue points represent imprinted genes expressed from maternal and paternal alleles, respectively. Dashed lines depict 2-fold changes. The R2 was determined by Pearson’s correlation. (D) Five imprinted genes with more than 2-fold changes in expression lev ...
A receptor like kinase gene with expressional responsiveness on
... Previous reports have shown that the genes, OsKS4(LOC_Os04g10060) and Os04g10010(LOC_Os04g10010), function as marker genes involved for the downstream responses associated PTI (Park et al. 2012; Chen et al. 2014a). Thus, we asked whether these two genes in Xa21 plants are also responsive to Xoo. For ...
... Previous reports have shown that the genes, OsKS4(LOC_Os04g10060) and Os04g10010(LOC_Os04g10010), function as marker genes involved for the downstream responses associated PTI (Park et al. 2012; Chen et al. 2014a). Thus, we asked whether these two genes in Xa21 plants are also responsive to Xoo. For ...
Relationship between expression amount and codon usage bias
... families studied were the yeast 2 gene family which have only two genes in a single family, all gene family with 50% or greater similarities between the gene pairs and big gene family, which have more then 5 genes in a single gene family. Data normalization The expression rate difference values coul ...
... families studied were the yeast 2 gene family which have only two genes in a single family, all gene family with 50% or greater similarities between the gene pairs and big gene family, which have more then 5 genes in a single gene family. Data normalization The expression rate difference values coul ...
Tracking the evolution of 3D gene organization demonstrates its
... (6,7,11) and TF binding sites (8,12). In addition, genes encoding interacting proteins, that form protein complexes and genes along the same pathway have been shown to be co-localized in 3D in human (10). Chromosomes’ 3D conformation has been shown to be related to tissue-specific regulation (13,14) ...
... (6,7,11) and TF binding sites (8,12). In addition, genes encoding interacting proteins, that form protein complexes and genes along the same pathway have been shown to be co-localized in 3D in human (10). Chromosomes’ 3D conformation has been shown to be related to tissue-specific regulation (13,14) ...
Identifying a Novel Isoform of the AZIN1 Gene by Combining High
... reading frame that would change the terminus of the subsequent protein from Ser-Asp-Glu-Asp-stop to PheArg-stop. Follow-up studies could validate this finding on the protein level and then measure gene expression of this new isoform in various tissues, subjects, and time-points. Moreover, the method ...
... reading frame that would change the terminus of the subsequent protein from Ser-Asp-Glu-Asp-stop to PheArg-stop. Follow-up studies could validate this finding on the protein level and then measure gene expression of this new isoform in various tissues, subjects, and time-points. Moreover, the method ...
Morphology of nuclear transcription | SpringerLink
... occurs there in foci (Mosgoeller et al. 1998). Consistent with these observations, Pol I and the important transcriptional cofactor UBF (upstream binding factor) are most abundant in FCs and occur at lower intensities in DF. rRNA can be found in DF and GC where coordinated processing of the 45S pre- ...
... occurs there in foci (Mosgoeller et al. 1998). Consistent with these observations, Pol I and the important transcriptional cofactor UBF (upstream binding factor) are most abundant in FCs and occur at lower intensities in DF. rRNA can be found in DF and GC where coordinated processing of the 45S pre- ...
Temporal Transcriptome Changes Induced by
... (MDV) and characterized by T cell lymphoma and infiltration of lymphoid cells into various organs such as liver, spleen, peripheral nerves and muscle. Resistance to MD and disease risk have long been thought to be influenced both by genetic and environmental factors, the combination of which contrib ...
... (MDV) and characterized by T cell lymphoma and infiltration of lymphoid cells into various organs such as liver, spleen, peripheral nerves and muscle. Resistance to MD and disease risk have long been thought to be influenced both by genetic and environmental factors, the combination of which contrib ...
32 Fungal Genetics Newsletter Ursula Kües , Michaela J. Klaus
... Often, integration occurs at multiple sites indicating that more than one plasmid copy was incorporated. This feature prompted us to study transformation with mixtures of several different plasmids in several genetic backgrounds. We found multiple cotransformation to be efficient even with four diff ...
... Often, integration occurs at multiple sites indicating that more than one plasmid copy was incorporated. This feature prompted us to study transformation with mixtures of several different plasmids in several genetic backgrounds. We found multiple cotransformation to be efficient even with four diff ...
Opposing Activities of DRM and MES
... et al. 1991). Thus, the MES proteins cooperate to promote development of healthy germ cells by activating germline genes and repressing somatic genes. Another feature of gene regulation in C. elegans hermaphrodite germ cells is the significant dampening of transcription from the X chromosomes. Somati ...
... et al. 1991). Thus, the MES proteins cooperate to promote development of healthy germ cells by activating germline genes and repressing somatic genes. Another feature of gene regulation in C. elegans hermaphrodite germ cells is the significant dampening of transcription from the X chromosomes. Somati ...
The co-repressor hairless has a role in epithelial cell
... The Hr gene encodes a 130 kDa protein (HR) that is highly expressed in skin and brain (Cachon-Gonzalez et al., 1994; Potter et al., 2001a). Although the HR protein lacks sequence identity to proteins of known structure or function, we recently demonstrated that HR functions as a nuclear receptor cor ...
... The Hr gene encodes a 130 kDa protein (HR) that is highly expressed in skin and brain (Cachon-Gonzalez et al., 1994; Potter et al., 2001a). Although the HR protein lacks sequence identity to proteins of known structure or function, we recently demonstrated that HR functions as a nuclear receptor cor ...
Flexible expressed region analysis for RNA
... aligned to each base in the genome) to identify differential expression signal at each individual base and merges adjacent bases with similar signal into candidate regions. However, the software for our first version was limited to small sample sizes, the ability to interrogate targeted genomic loci ...
... aligned to each base in the genome) to identify differential expression signal at each individual base and merges adjacent bases with similar signal into candidate regions. However, the software for our first version was limited to small sample sizes, the ability to interrogate targeted genomic loci ...
Organization and dynamics of plant interphase chromosomes
... values do not differ significantly from each other indicating the absence of ‘hot spots’ or ‘cold spots’ of alignment within this euchromatic region of the Arabidopsis genome. The entire 1.2-Mb region displayed alignment in 69% of homologs; partial alignment or separation within this region occurred ...
... values do not differ significantly from each other indicating the absence of ‘hot spots’ or ‘cold spots’ of alignment within this euchromatic region of the Arabidopsis genome. The entire 1.2-Mb region displayed alignment in 69% of homologs; partial alignment or separation within this region occurred ...
MCB317 Topic 10, part 4, A Story of Txn Sp14
... Which, if any encode txn factors? Secondary screen to identify possible txn factors ...
... Which, if any encode txn factors? Secondary screen to identify possible txn factors ...
and GvpD-mediated transcription regulation of the p
... The transcription of the 14 p-gvp genes involved in gas vesicle formation of Halobacterium salinarum PHH1 is driven by the four promoters pA, pD, pF and pO. The regulation of these promoters was investigated in Haloferax volcanii transformants with respect to the endogenous regulatory proteins GvpE ...
... The transcription of the 14 p-gvp genes involved in gas vesicle formation of Halobacterium salinarum PHH1 is driven by the four promoters pA, pD, pF and pO. The regulation of these promoters was investigated in Haloferax volcanii transformants with respect to the endogenous regulatory proteins GvpE ...
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... progression were inferred. In order to identify these genes and investigate their function in later stages of meiosis, we created three models with diminishing Yp and Zfy gene complements (but lacking the Y-long-arm). Since the Y-long-arm mediates pairing and exchange with the X via their pseudoauto ...
... progression were inferred. In order to identify these genes and investigate their function in later stages of meiosis, we created three models with diminishing Yp and Zfy gene complements (but lacking the Y-long-arm). Since the Y-long-arm mediates pairing and exchange with the X via their pseudoauto ...
Early Development of Vertebrates
... - development inside another body makes observation very difficult Although mammalian eggs are isolecithal and contain very little yolk, their embryos act as if they are sitting on top a large imaginary ball of yolk - i.e. gastrulate like fish, reptiles, and birds ...
... - development inside another body makes observation very difficult Although mammalian eggs are isolecithal and contain very little yolk, their embryos act as if they are sitting on top a large imaginary ball of yolk - i.e. gastrulate like fish, reptiles, and birds ...