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Tobacco TTG2 regulates vegetative growth and seed production via
Tobacco TTG2 regulates vegetative growth and seed production via

... and Gretchen Hagen 3 (GH3) gene families [31–33]. Different ARFs regulate the expression of target genes by binding the auxin response elements, TGTCTC, GAGACA [29, 34, 35], or TGTCT [26] that are present in target promoters. These elements have numerous potential combinations with ARFs [4, 19, 30], ...
Refine Query Set - University of Delaware
Refine Query Set - University of Delaware

... Regionalization of a simple neural tube is a fundamental event during the development of central nervous system. To analyze in vivo the molecular mechanisms underlying the development of mesencephalon, we ectopically expressed Engrailed, which is expressed in developing mesencephalon, in the brain o ...
Type-2 fuzzy Approach for Disease-Associated Gene Identification on Microarrays  Yan-Fei Wang
Type-2 fuzzy Approach for Disease-Associated Gene Identification on Microarrays Yan-Fei Wang

... was mentioned in [22] as the most significantly amplified gene in the tumors. CITED2 is required for fetal lung maturation [23]. Researchers found CITED2 was highly expressed in lung cancer but not in normal tissues, which demonstrates that CITED2 plays a key role in lung cancer progression [24]. Ge ...
Chapter 27 Phage Strategies
Chapter 27 Phage Strategies

Boundary elements and nuclear organization
Boundary elements and nuclear organization

... blocking the spread of heterochromatin has been described for a variety of identified insulator elements (for a list of such elements, see West et al., 2002), suggestive of their role in preserving the separation between heterochromatin and euchromatin. Recently, the heterochromatic repressive chrom ...
The ECF sigma factors of Streptomyces coelicolor A3(2)
The ECF sigma factors of Streptomyces coelicolor A3(2)

... through genome sequencing projects. Indeed, for several bacteria, including Bacillus subtilis, Mycobacterium tuberculosis and S. coelicolor, ECF ␴ factors represent the major class of ␴ factors. It is striking that relatively few ECF ␴ factors were discovered by traditional genetic approaches. For e ...
RNA transcription and mRNA processing
RNA transcription and mRNA processing

... of proto-oncogenes leads to overexpression of other genes, because many proto-oncogenes are transcription factors, signal proteins that interact with molecules controlling intracellular growth and growth factors released by cells to stimulate other cells to divide. Overexpression can occur when ther ...
Part 2 - Laboratory of Aquaculture & Artemia Reference Center
Part 2 - Laboratory of Aquaculture & Artemia Reference Center

... level approaches are yet to be iniated such as functional genomics, population genomics etc. Artemia shows well developed gene regulatory system for its survival even under extreme conditions. Artemia seems to be a promising system for stress response studies as observed in our laboratory since it s ...
Qualitative Analysis of Regulatory Graphs: A Computational Tool
Qualitative Analysis of Regulatory Graphs: A Computational Tool

... From a computational perspective, our approach takes the form of a series of Java classes, collectively called GIN-sim. This simulation tool is part of a wider software project, which provides a series of modules covering the integration, the processing, and the modelling of functional regulatory da ...
Systematic analysis of gene properties influencing organ system
Systematic analysis of gene properties influencing organ system

... yeast and mice have illustrated that the phenotypic responses occurring after single gene perturbations are greatly variable. While perturbations of essential genes cause lethal effects, other gene alterations show undetectable, subtle or environment-dependent phenotypes (Hillenmeyer et al., 2008; N ...
Laws of Inheritance
Laws of Inheritance

... forked-line method; now we will use the probability method to examine the genotypic proportions for a cross with even more genes. For a trihybrid cross, writing out the forked-line method is tedious, albeit not as tedious as using the Punnett-square method. To fully demonstrate the power of the prob ...
Mammals Differences between the Chicken and Antagonist in the
Mammals Differences between the Chicken and Antagonist in the

... (13). Third, icIL-1RN isoforms may be released from cells and act in a similar way to sIL-1RN by antagonizing membrane-bound IL-1RI (14–17). Other, more recently discovered IL-1 family members (IL-1F5– F11) have been less extensively studied. However, functional roles for most of these are beginning ...
Laws of Inheritance
Laws of Inheritance

... short plants and yellow owers, then when the gametes are formed, the tall and red alleles will go together into a gamete and the short and yellow alleles will go into other gametes. These are called the parental genotypes because they have been inherited intact from the parents of the individual pr ...
Powerpoint template for scientific posters (Swarthmore College)
Powerpoint template for scientific posters (Swarthmore College)

... Our approach for studying runt function takes advantage of a system that allows for genetically controlled quantitative manipulation of runt activity in all cells of the blastoderm stage Drosophila embryo. Central to this work is the observation that the engrailed expression correlates with embryo l ...
The causes and molecular consequences of polyploidy in
The causes and molecular consequences of polyploidy in

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WheatNet: A genome-scale functional network for hexaploid bread

... bioRxiv preprint first posted online Feb. 6, 2017; doi: http://dx.doi.org/10.1101/105098. The copyright holder for this preprint (which was not peer-reviewed) is the author/funder. It is made available under a CC-BY 4.0 International license. ...
Parental Legacy Determines Methylation and Expression of an
Parental Legacy Determines Methylation and Expression of an

... intron. On Northern analysis only a single transcript of 2.3 kb is detected (data not shown), suggesting that transcription initiation starts within the immunoglobulin-derived DNA segment. But transcription at a cryptic promoter in the first intron of c-myc might be indistinguishable from transcript ...
Robust Prediction of Expression Differences among Human
Robust Prediction of Expression Differences among Human

... Many genetic variants that are significantly correlated to gene expression changes across human individuals have been identified, but the ability of these variants to predict expression of unseen individuals has rarely been evaluated. Here, we devise an algorithm that, given training expression and ...
1. Introduction Organisms are made up of the sum of their genes and
1. Introduction Organisms are made up of the sum of their genes and

... α-helical structure (Takagaki et al., 1992). In 2005 Deka and colleagues could show that during RNA binding the helix is unfolded. As the DSE is only weakly conserved, they suggested that an increased flexibility of the protein chain is necessary to bind multiple related RNA sequences. The C-termina ...
The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI.

... fully characterized; 26 have similarity to proteins of known biochemical and physiological function; 6 are homologous to proteins of known biochemical function; and 55 have a weak homology to known proteins. These weak similarities alone are insufficient to confidently assign function. This leaves 2 ...
The DNA sequence and biology of human chromosome 19
The DNA sequence and biology of human chromosome 19

... Table S8: Read-through transcripts found on human chromosome 11. [Excel 2003, 25 KB] Table S9: CpG islands versus number of variants in expressed genes. [Excel 2003, 17 KB] ...
BISC403 Genetic and Evolutionary Biology Spring, 2011 May 16
BISC403 Genetic and Evolutionary Biology Spring, 2011 May 16

... Consider an E. coli cell which is a partial diploid due to the presence of a stable plasmid carrying the lac operon. If the genotype of this cell for these five genes is - + + + - + - c + + (I p o Z Y /I p o Z Y ), what will be the phenotype for ß-galactosidase expression? inducible constitutive abs ...
Operon Comparison Chart
Operon Comparison Chart

... the repressor to activate it), which turns the operon OFF (so no more tryptophan is made) ...
Playing by pair-rules?
Playing by pair-rules?

Molecular Testing and Clinical Diagnosis
Molecular Testing and Clinical Diagnosis

... – On glass slides, hybridization can be detected by fluorescence and spot color detection by a microarray scanner. – The silicone chip consists of electrodes, independently addressable via an electronic control system. Hybridization is detected by changes in resistance. ...
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Long non-coding RNA

Long non-coding RNAs (long ncRNAs, lncRNA) are non-protein coding transcripts longer than 200 nucleotides. This somewhat arbitrary limit distinguishes long ncRNAs from small regulatory RNAs such as microRNAs (miRNAs), short interfering RNAs (siRNAs), Piwi-interacting RNAs (piRNAs), small nucleolar RNAs (snoRNAs), and other short RNAs.
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