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Profile Documents Logout
Upload
to this tutorial as a PDF
to this tutorial as a PDF

... Each amino acid in a polypeptide chain is assigned a sequential number. You can use these number identifiers to select individual amino acids or ranges of amino acids. Note that there can be more than one amino acid with a given number, if there are more than one polypeptide chains in a structure fi ...
Stoichiometry: Calculations with Chemical Formulas and Equations
Stoichiometry: Calculations with Chemical Formulas and Equations

... analyzed through combustion in a chamber like this – C is determined from the mass of CO2 produced – H is determined from the mass of H2O produced – O is determined by difference after the C and H have been determined Stoichiometry ...
File
File

... 2) Identify the limiting reagent when 6.00 g HCl reacts with 5.00 g Mg. Mg (s) + 2HCl (aq)  MgCl2 (aq) + H2 (g) ...
TOPIC 7. CHEMICAL CALCULATIONS I
TOPIC 7. CHEMICAL CALCULATIONS I

... Atomic structure revisited. In Topic 2, atoms were described as ranging from the simplest atom, H, containing a single proton and usually no neutrons in its nucleus with one electron orbiting outside that nucleus, through to very large atoms such as uranium for example which contains 92 protons and ...
The Properties of Mixtures: Solutions and Colloids Dr.ssa Rossana
The Properties of Mixtures: Solutions and Colloids Dr.ssa Rossana

... To convert a term based on amount (mol) to one based on mass, you need the molar mass. These conversions are similar to mass-mole conversions. To convert a term based on mass to one based on volume, you need the solution density. Working with the mass of a solution and the density (mass/volume), y ...
TOPIC 7. CHEMICAL CALCULATIONS I
TOPIC 7. CHEMICAL CALCULATIONS I

... Atomic structure revisited. In Topic 2, atoms were described as ranging from the simplest atom, H, containing a single proton and usually no neutrons in its nucleus with one electron orbiting outside that nucleus, through to very large atoms such as uranium for example which contains 92 protons and ...
CHEM 121 Chp 5 Spaulding
CHEM 121 Chp 5 Spaulding

... How many grams of NH3 are produced from 8.23 g of H2?  Use molar mass to convert g to moles  Use molar ratio to convert between moles  Use molar mass to convert moles to g ...
29 Sept 08 - Seattle Central
29 Sept 08 - Seattle Central

... 2. Write the unbalanced equation that summarizes the reaction in step 1. 3. Balance the equation by inspection. Do not change the identities (formulas) of any of the reactants or products. ...
chapter 3 Questions
chapter 3 Questions

... 40. What is the empirical formula of the compound with the following composition? 40.1 percent C, 6.6 percent H, 53.3 percent O. A) CH2O2 B) CH2O C) C2H6O D) C2H4O2 41. Monosodium glutamate (MSG), a food-flavor enhancer, has been blamed for “Chinese restaurant syndrome,” the symptoms of which are he ...
Teaching with SCIGRESS - Photochemical Dynamics Group
Teaching with SCIGRESS - Photochemical Dynamics Group

... One of the important achievements in chemistry is our ability to predict the bulk properties of a compound based on what we know of the microscopic structure of molecules and ions. Molecular geometry provides much of the information upon which these predictions are made. From lectures you have learn ...
Lipid Rafts Presentation
Lipid Rafts Presentation

... Korade, Zeljka. "Lipid rafts, cholesterol, and the brain." Neuropharmacology 55 (2008): 1265-273. Luckey, Mary. Membrane Structural Biology : With Biochemical and Biophysical Foundations. New York: ...
Chapter 5 Photosynthesis
Chapter 5 Photosynthesis

... pH difference between the thylakoid space and the stroma is about 2 to 3. If only the protons would maintain the membrane potential, the potential difference would be about 120 mV to 180 mV according to Nernst equation. The measured membrane potential is however only 10 mV due to the contribution of ...
Chemistry booklet
Chemistry booklet

... mℓ = 0, ONE s-orbital, mℓ = 0, ±1, THREE p-orbitals mℓ = 0, ±1, ±2, FIVE d-orbitals ms = SPIN quantum number, ms = +½ or -½. Eg. If n = 2, then ℓ = 0 or 1, and for ℓ = 0, mℓ = 0 ; and for ℓ = 1, mℓ = 0 +1 -1, For ℓ = 0, mℓ = 0 only : this defines one orbital – in this case the 2s-orbital. For ℓ = 1, ...
Chem 171-2-3: Final Exam Review Multiple Choice Problems 1
Chem 171-2-3: Final Exam Review Multiple Choice Problems 1

... statement about this cell is not true? a. The mass of the zinc electrode will increase as the cell discharges. b. The copper electrode is the cathode. c. Electrons will flow through the external circuit from the zinc electrode to the copper electrode. d. The cathode half reaction is Cu2+ + 2 e– Ÿ Cu ...
DEPARTMENT OF CHEMISTRY AND CHEMICAL TECHNOLOGY
DEPARTMENT OF CHEMISTRY AND CHEMICAL TECHNOLOGY

... Print your name: _____________________________________________ ...
H ydrop hobicity-hydrop hilicity of staphylococci
H ydrop hobicity-hydrop hilicity of staphylococci

... strains hydrophilic. Thus, determination of hydrophobicity may be a useful additional test for capsulation. However, a non-capsulate S. aureus strain was hydrophilic. Trypsin treatment converted strains from hydrophobic to hydrophilic. Isolated bacterial cell wall preparation, either crude or purifi ...
Spring 2008
Spring 2008

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Stoichiometry worksheet KEY
Stoichiometry worksheet KEY

... e) Use the answers from questions b, c, and d above to show that this equation obeys the law of conservation of mass. Mass of reactants = mass of products (52.0 g C2H2 + 160 g O2) = (176 g CO2 + 36.0 g H2O) 212 g reactants = 212 g products ...
Moles
Moles

... Steps to Balancing Equations 1.Compare the numbers of atoms on each side of the equation 2.Start with the most complicated molecules FIRST! 3.Leave H and O until the end 4.Place COEFFICIENTS in front of the compound to try and balance the atoms 5.Check your answer to see if: - The numbers of atoms ...
Ch. 12 Stoichiometry
Ch. 12 Stoichiometry

... Step 2: Use the unknown and known in the equation to develop a mole ratio: 2 mol NH3 (unknown from equation) 1 mol N2 (known from equation) Step 3: multiply the known by the mole ratio: 0.60 mol N2 ...
Document
Document

... Solutions • When table salt is mixed with water, it seems to disappear, or become a liquid – the mixture is homogeneous  the salt is still there, as you can tell from the taste, or simply boiling away the water ...
Chapter 11 Chemical Calculations
Chapter 11 Chemical Calculations

... Given % composition and molar mass be able to determine the molecular formula. This can be done by two different procedures choose the one that you like best. 11-6 Combustion Analysis This is another fairly standard technique that is used in many labs, but I think we will skip for now. 11-7 Coeffici ...
CHEM 1411 – STUDY-GUIDE-for-TEST-2
CHEM 1411 – STUDY-GUIDE-for-TEST-2

... 56. During volcanic eruptions, hydrogen sulfide gas is given off and oxidized by air according to the following chemical equation: 2H2S(g) + 3O2(g)  2SO2(g) + 2H2O(g) Calculate the standard enthalpy change for the above reaction given: 3S(s) + 2H2O(g)  2H2S(g) + SO2(g) H° = 146.9 kJ/mol S(s) + O2 ...
Stoichiometry notes 1
Stoichiometry notes 1

... Pressure ...
Word Pro
Word Pro

... 4. Write BALANCED NET IONIC EQUATIONS for the following reactions: (b) CaBr2(aq) + AgNO3(aq) → AgBr(s) + Ca(NO3)2(aq) Br ¯(aq) + Ag+(aq) → AgBr(s) (c) PbS(s) + HNO3(aq) → Pb(NO3)2(aq) + H2S(g) PbS(s) + 2 H+(aq) → Pb2+(aq) + H2S(g) (d) For the reaction between aqueous copper(ll) sulfate and aqueous s ...
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Implicit solvation

Implicit solvation (sometimes known as continuum solvation) is a method of representing solvent as a continuous medium instead of individual “explicit” solvent molecules most often used in molecular dynamics simulations and in other applications of molecular mechanics. The method is often applied to estimate free energy of solute-solvent interactions in structural and chemical processes, such as folding or conformational transitions of proteins, DNA, RNA, and polysaccharides, association of biological macromolecules with ligands, or transport of drugs across biological membranes. The implicit solvation model is justified in liquids, where the potential of mean force can be applied to approximate the averaged behavior of many highly dynamic solvent molecules. However, the interiors of biological membranes or proteins can also be considered as media with specific solvation or dielectric properties. These media are continuous but not necessarily uniform, since their properties can be described by different analytical functions, such as “polarity profiles” of lipid bilayers. There are two basic types of implicit solvent methods: models based on accessible surface areas (ASA) that were historically the first, and more recent continuum electrostatics models, although various modifications and combinations of the different methods are possible. The accessible surface area (ASA) method is based on experimental linear relations between Gibbs free energy of transfer and the surface area of a solute molecule. This method operates directly with free energy of solvation, unlike molecular mechanics or electrostatic methods that include only the enthalpic component of free energy. The continuum representation of solvent also significantly improves the computational speed and reduces errors in statistical averaging that arise from incomplete sampling of solvent conformations, so that the energy landscapes obtained with implicit and explicit solvent are different. Although the implicit solvent model is useful for simulations of biomolecules, this is an approximate method with certain limitations and problems related to parameterization and treatment of ionization effects.
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