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... – I put an entire genome in a test tube. – I added DNA polymerase III and dNTPs. – I added very specific DNA primers that mapped onto a specific gene. – Then I started heating and cooling the DNA over and over and over and over…. ...
Answers chapter 9
Answers chapter 9

... sealed with DNA ligase. Eukaryotes use a similar system to repair mismatches, involving enzymes homologous to MutS and MutL, although the eukaryotic system is more complex (for example, eukaryotes have specialized MutS homologs that can specifically detect different types of replication errors). One ...
Answers questions chapter 12
Answers questions chapter 12

... end of the transposon. Once bound to the ends, the transposase brings them together to form a proteinDNA complex called the synaptic complex or transpososome. The transposase subunits then make double-strand cuts at both ends of the transposon, liberating the transposon and leaving a doublestranded ...
25Ch03nucleicacids2008
25Ch03nucleicacids2008

... AP Biology ...
Ch - TeacherWeb
Ch - TeacherWeb

... A. Semiconservative Replication: proposed by Watson and Crick; parental strands of DNA separate, serve as templates and produce DNA molecules that have one strand of parental DNA and one strand of new DNA. 1. unwinding: the double helix is unwound and unzipped by the enzyme DNA helicase a. hydrogen ...
NAME Date DNA Structure Review Figure 1 The untwisted form of
NAME Date DNA Structure Review Figure 1 The untwisted form of

... 12. Figure 5 shows a segment of a DNA molecule with five steps. The steps are labeled 1 to 5. Look at step #1 and #3. Describe any differences you see between these steps. ____________________________________________________ ___________________________________________________________________________ ...
DNA
DNA

... • B-form: the duplex structure proposed by Watson and Crick is referred as the B-form DNA. •It is the standard structure for DNA molecules. ...
Supplementary
Supplementary

... were purchased from IDT. 1.2. Detecting Target DNA in the Presence of a DNA Library For the selectivity study, circularized DNA was produced in the presence of a library of non-complementary DNA. The linear DNA, target DNA, H1N1 DNA, HIV DNA and Scramble DNA were mixed in nuclease-free water at a fi ...
DNA  1. Evidence for DNA as the genetic material.
DNA 1. Evidence for DNA as the genetic material.

... When a cell divides, the DNA must be doubled so that each daughter cell gets a complete copy. It is important for this process to be high fidelity because any errors made would be inherited by the offspring and these errors would tend to accumulate with each generation. b. Because each strand is com ...
Chapter 10 Gene Mutation: Origins and Repair Processes
Chapter 10 Gene Mutation: Origins and Repair Processes

... In this example, a uracil that was formed by deamination of cytosin is removed from the sugar-phosphate backbone by DNA glycosylase. These enzymes create apurinic or apyrimidinic (AP) sites. AP endonuclease recognizes these AP sites and cleaves the DNA strand. The remaining deoxyribose molecule is r ...
RFLPs, PCR, Gel Electrophoresis
RFLPs, PCR, Gel Electrophoresis

... process called gel electrophoresis In this process, the DNA fragments are placed in wells on a “jello-like gel- called agarose (or agar) The agarose is fibrous and acts like a net An electrical current is passed through the gel Since DNA is negatively charged, the fragments of DNA are attracted to t ...
Meiosis - mvhs
Meiosis - mvhs

... few examples) Fission ...
No Slide Title
No Slide Title

... Chargaff’s rules 1940s 1. Base composition of DNA varies from one species to another 2. DNA from different tissues of same species have same base composition 3. Base composition of DNA in given species does not change with age, nutritional state, environment 4. In all cellular DNAs, regardless of sp ...
Recombination - Transformation
Recombination - Transformation

... crucial for the repair of double-strand breaks in DNA. Such breaks are repaired principally by error-free homologous recombination and error-prone non-homologous end-joining. The former requires genes of the RAD52 epistasis group in yeast. RecQ helicases are thought to be involved in homologous reco ...
Chameleon Sequences: One Sequence with More
Chameleon Sequences: One Sequence with More

... The ability of amino-acid sequences to convert from an alpha-helical to a beta-strand conformation has received extensive attention recently, as this structural change may induce many proteins to self-assemble into so-called amyloid fibrils and cause fatal diseases (see next section). A number of se ...
What is the Structure of DNA?
What is the Structure of DNA?

... How is DNA Replicated? The DNA is a template for the synthesis of new DNA Three possible replication patterns: • Semiconservative replication • Conservative replication • Dispersive replication ...
Chapter 13
Chapter 13

...  Often the DNA samples collected are too small  Polymerase Chain Reaction (PCR) is a technique that quickly produces many copies of a DNA fragment ...
Chromosomes_posted
Chromosomes_posted

... Translocations ...
DNA Puzzle Paragraph
DNA Puzzle Paragraph

... quite variable. A relatively simple organism, such as the bacterium Escherichia coli, contains around 4.7 million base pairs of DNA. More complex organisms, on the other hand can contain more DNA by several orders of magnitude. Mammals, for instance, have on the order of three billion base pairs of ...
RNA nucleotides
RNA nucleotides

... 4. However, tRNA can’t start matching its anticodon and dropping off amino acids until it comes to the start codon (AUG). Now once it sees the start codon, it’s on!!!! 5. tRNA will keep matching it’s anticodon with mRNA’s codon and leaving behind amino acids until it comes to one of the stop codons. ...
Chapter 2 DNA to end Extended Response
Chapter 2 DNA to end Extended Response

... occurs during (S phase of) interphase/in preparation for mitosis/cell division; DNA replication is semi-conservative; unwinding of double helix / separation of strands by helicase (at replication origin); hydrogen bonds between two strands are broken; each strand of parent DNA used as template for s ...
I-Modified Nucleosides as DNA-Sugar Centered Radical Precursors
I-Modified Nucleosides as DNA-Sugar Centered Radical Precursors

... interaction of DNA, oligonucleotides or nucleosides with ionizing radiation (γ-radiolysis), metal complexes (Mn-TMPyP, Cu(oP)2 and anticancer drugs such as enediynes). Photolysis of photoreactive groups that are specific C1’ radical precursors have been used by Greenberg and Chatgilialoglu for kinet ...
DNA
DNA

... DNA Replication – Duplicating DNA • Before a cell divides, it duplicates its DNA in a process called replication. • Replication ensures that each resulting cell will have a complete set of DNA. • Occurs in the S phase of Interphase. ...
Chapter 12 Primary Structure of Nucleic Acids Sequencing Strategies
Chapter 12 Primary Structure of Nucleic Acids Sequencing Strategies

... the major and minor grooves show a different hydrogen bonding possibility for each base pair, hence proteins can recognize which base pair is which. Many regulatory proteins (as well as the restriction enzymes we discussed earlier) are therefore capable of recognizing specific base sequences. The pr ...
File - Mr. Blaschke`s Science Class
File - Mr. Blaschke`s Science Class

... 2. The linking number does not change whether the covalently closed circle is forced to lie in a plane in a stressed conformation or whether it is allowed to supercoil about itself freely in space. 3. The linking number of a circular DNA can only be changed by breaking a phosphodiester bond in one o ...
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Holliday junction



A Holliday junction is a branched nucleic acid structure that contains four double-stranded arms joined together. These arms may adopt one of several conformations depending on buffer salt concentrations and the sequence of nucleobases closest to the junction. The structure is named after the molecular biologist Robin Holliday, who proposed its existence in 1964.In biology, Holliday junctions are a key intermediate in many types of genetic recombination, as well as in double-strand break repair. These junctions usually have a symmetrical sequence and are thus mobile, meaning that the four individual arms may slide though the junction in a specific pattern that largely preserves base pairing. Additionally, four-arm junctions similar to Holliday junctions appear in some functional RNA molecules.Immobile Holliday junctions, with asymmetrical sequences that lock the strands in a specific position, were artificially created by scientists to study their structure as a model for natural Holliday junctions. These junctions also later found use as basic structural building blocks in DNA nanotechnology, where multiple Holliday junctions can be combined into specific designed geometries that provide molecules with a high degree of structural rigidity.
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