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1 DAI
2 DAI
4 DAI
5 DAI
DESCRIPTION
1
(0.74)
2
(0.63)
3
(0.68)
4
(0.69)
5
(0.88)
6
(0.65)
Supplemental Fig. 1. Cluster analysis of 114 genes induced in response 5 viruses over 5 day time course. Hierarchical clustering was used to group virus-induced genes by their expression profiles. A column represents a treatment and
a row represents a gene. The median expression level was determined for each gene across the 24 treatments, and for each treatment a gene was assigned red if expression was above the median, green if expression was below the median,
and black if expression was near the median. The time points are indicated across the top (DAI = days after inoculation). The viruses are indicated vertically (MOCK = mock inoculated, TVCV = turnip vein clearing tobamovirus,
ORMV = oilseed rape mosaic tobamovirus, PVX = potato virus X potexvirus, CMV = cucumber mosaic cucumovirus, and TuMV = turnip mosaic potyvirus). The DESCRIPTION for each gene includes GeneBank accession numbers and
their deduced functions. Genes represented by multiple probe sets occur more than once. Correlation coefficients for genes in each cluster is given in parentheses below the cluster number.