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Characterization and identification of bacteria Based on phenotype Systematics (taxonomy) of bacteria • Study of diversity of microorganisms and their relationships • Includes: – clasification (ordering of B. into groups) – nomenclature – identification Most important classes of characters • • • • • • • • • Morfological (cels including staining) Cultural Physiological Nutritional Biochemical Ecological Genetic Antigenic Phage susceptibility In classification of bacteria • As many charactes as posible should be studied – describtion of new species In identification of bacteria • Number of tests applied should be kept to a minimum – concetration for simple methods and for characters with very good distinguishing value – tests must be standardized Characteristics of primary importance I. • • • • 1. Pure culture (make sure to have) 2. Examine Gram-stained cells 3. Look for motility or flagela 4. Examine colonies Characteristics of primary importance II. • 5.Test for oxygen requirements • 6.Test for dissimilation of glucose (oxidative/fermentative) • 7.Select tests useful for distinguishing between the genera • 8.Select the test apllicable for species identification Mistakes • Determination of shape • Gram reaction • Motlity Biochemical characters • • • • • • • Oxidase test Catalase test Carbohydrate breakdown O-F of glucose Acid formation from sugars Gas formation from glucose ONPG test (beta-galactosidase activity) Biochemical characters • • • • Reduction of nitrate to nitrite Indole test VP test (acetoin production) Arginin dihydrolase test