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1 PilB localisation correlates with the direction of twitching motility in the 2 cyanobacterium Synechocystis sp. PCC 6803 3 4 5 Nils Schuergers1, Dennis J. Nürnberg2,3, Thomas Wallner1, Conrad W. Mullineaux2,4, 6 Annegret Wilde1 7 8 1Molecular 9 Germany Genetics, Institute of Biology III, University of Freiburg, 79104 Freiburg, 10 2School 11 London E1 4NS, UK 12 3Department 13 4Freiburg 14 Freiburg, Germany of Biological and Chemical Sciences, Queen Mary University of London, of Life Sciences, Imperial College London, London SW7 2AZ Institute for Advanced Studies (FRIAS), University of Freiburg, 79104 15 16 * 17 76120397828; Fax +49 (0) 761-203-2745 For Correspondence. E-mail Annegret.Wilde@biologie.uni-freiburg.de; Tel. +49 (0) 18 19 Running title: PilB localisation in Synechocystis 20 21 Contents category: Cell and Molecular Biology of Microbes 22 23 Summary: 225 words 24 Main text: 3345 words 25 Tables: 0 26 Figures: 4 27 Abbreviations: T4P, type IV pili. 28 1 29 SUMMARY 30 31 Twitching motility depends on the adhesion of type IV pili to a substrate, with cell 32 movement driven by extension and retraction of the pili. The mechanism of twitching 33 motility, and the events that lead to a reversal of direction, are best understood in 34 rod-shaped bacteria such as Myxococcus xanthus. In M. xanthus, the direction of 35 movement depends on the unipolar localisation of the pilus extension and retraction 36 motors PilB and PilT to opposite cell poles. Reversal of direction results from 37 relocalisation of PilB and PilT. Some cyanobacteria utilise twitching motility for 38 phototaxis. Here, we examine twitching motility in the cyanobacterium Synechocystis 39 sp. PCC 6803, which has a spherical cell shape without obvious polarity. We use a 40 motile Synechocystis sp. PCC 6803 strain expressing a functional GFP-tagged PilB1 41 protein to show that PilB1 tends to localise in “crescents” adjacent to a specific region 42 of the cytoplasmic membrane. Crescents are more prevalent under the low light 43 conditions that favour phototactic motility, and the direction of motility strongly 44 correlates with the orientation of the crescent. We conclude that the direction of 45 twitching motility in Synechocystis sp. PCC 6803 is controlled by the localisation of 46 the type IV pilus apparatus, as it is in M. xanthus. The PilB1 crescents in the 47 spherical cells of Synechocystis can be regarded as being equivalent to the leading 48 pole in the rod-shaped cells. 49 50 Introduction 51 52 Many prokaryotes are able to move in response to various signals. They use diverse 53 mechanisms and molecular machines for this movement, resulting not only in 54 different speeds but also different responses to environmental cues. Swimming using 55 flagellar motors and the molecular basis of chemotaxis in Proteobacteria is now 56 probably one of the best understood behavioural systems in prokaryotes (Wadhams 57 & Armitage, 2004). A second motility apparatus is represented by type IV pili (T4P), 58 appendages which are present in many bacteria, including some which also possess 59 flagella (Pelicic, 2008). T4P are evolutionarily related to type II secretion systems 60 (Peabody et al., 2003) and they are implicated not only in twitching motility but also in 61 DNA uptake, biofilm formation, pathogenesis and can act as conductive nanowires 62 (Gorby et al., 2006; Mattick, 2002). The cyanobacterium Synechocystis sp. PCC 2 63 6803 (hereafter Synechocystis) shows T4P-dependent phototactic behaviour in 64 response to unidirectional light irradiation. Speed as well as direction of movement 65 depend on intensity and quality of light. Low intensity red and green light induce 66 positive phototaxis on agar plates towards a light source while high intensity blue 67 light and UV-A illumination lead to a negative phototactic response (Choi et al., 1999; 68 Ng et al., 2003). Three distinct phases of light-induced movement of Synechocystis 69 cells can be distinguished (Bhaya et al., 2006). In phase I, single cells move mostly 70 independently of light direction. With higher cell density, phototactic behaviour 71 increases and results in an accumulation of cells on the front edge of a colony (phase 72 II). Phase III is characterized by a concerted movement of groups of cells along the 73 light gradient thereby generating macroscopic finger-like colony extensions on the 74 agar surface. T4P are needed for all phases of cell movement. Synechocystis cells 75 are densely covered by at least two types of appendages. It was demonstrated that 76 thick pili (6-8 nm diameter; 4-5 µm length) resemble T4P, whereas the biochemical 77 nature and genetic origin of the thinner pili (3-4 nm diameter; 1 µm length) are not 78 understood so far (Bhaya et al., 2000; Yoshihara et al., 2001). Genes encoding pilus 79 subunits and proteins involved in pilus biogenesis are conserved between 80 cyanobacteria and other gram-negative bacteria (Yoshihara & Ikeuchi, 2004). In 81 relation to the well-studied T4P apparatus from other gram negative bacteria such as 82 Pseudomonas aeruginosa (Burrows 2012), the following model can be assumed for 83 functioning of the Synechocystis T4P. The major structural component of the pilus, 84 the major pilin PilA1 and potentially several minor pilins (PilA2 to PilA11) are 85 synthesised as prepilins and incorporated into the cytoplasmic membrane after 86 maturation by the prepilin peptidase PilD. Pilins then polymerise outside the inner 87 membrane probably as a result of a conformational change of the integral membrane 88 protein PilC. This energy-requiring step is driven by the secretion ATPase PilB. The 89 growing pilus is transported through the outer membrane via a PilQ pore complex 90 and attaches to a solid surface. Movement of cells is achieved by retraction and 91 depolymerisation of the pilus catalysed by a second secretion ATPase, PilT. In 92 contrast to flagella-based motility, which depends on control of the direction and 93 speed of rotation of the fixed motor, twitching motility is regulated by dynamic 94 localisation of the two motor proteins PilB and PilT. In Myxococcus xanthus, a rod- 95 shaped bacterium, T4P proteins localise to both cell poles while the motor ATPases 96 show a unipolar localisation to opposite poles with PilB at the leading and PilT at the 3 97 lagging cell pole. Oscillation of the motor ATPases leads to a switch in cell polarity 98 and a reversal of movement (Bulyha et al., 2009). It is likely that the PilT paralogue 99 PilU localises only to the piliated cell pole in Pseudomonas aeruginosa (Chiang et al., 100 2005). Thus, motility in these rod-shaped bacteria is coupled to cell polarity. 101 102 Synechocystis is a coccoid bacterium without any obvious cell polarity. Here, we 103 analyse localisation of PilB in this organism in relation to single cell movement. This 104 organism has two copies of the pilB gene, pilB1 and pilB2. However, pilus assembly 105 is only lost in pilB1 mutants whereas pilB2 mutants retain pili on the cell surface and 106 are still motile, suggesting that PilB1 is the motor ATPase of the T4P (Yoshihara et 107 al., 2001). Nearly all cyanobacterial PilB1 proteins differ from those of other bacteria 108 by a C-terminal extension without sequence similarity to other PilB homologs 109 (Schuergers et al., 2014). This C-terminal domain is especially interesting because of 110 a conserved four cysteine-containing motif resembling a zinc finger. This C-terminal 111 extension of PilB1 was shown to be involved in binding of the putative RNA 112 chaperone Hfq in Synechocystis. PilB1 is important for correct localisation of Hfq and 113 for its function. Furthermore, correct localisation of Hfq at the pilus base is also 114 important for twitching motility and for formation of both types of pili in Synechocystis 115 (Schuergers et al., 2014). Here, we use a Synechocystis strain expressing a 116 functional GFP-tagged PilB1 protein to show that PilB1 tends to concentrate in 117 “crescents” adjacent to the plasma membrane in a single region of the cell periphery. 118 The direction of twitching motility strongly correlates with the orientation of the 119 crescent, which can be regarded as equivalent to the leading pole in the twitching 120 motility of rod-shaped bacteria. 121 122 METHODS 123 124 Growth conditions, bacterial strains, and mutant analysis. Cultures of motile 125 Synechocystis wild-type (originally obtained from S. Shestakov, Moscow State 126 University, Russia) and mutant strains were propagated on 0.75% (w/v) BG11 agar 127 plates (Rippka et al., 1979) at 30°C under white light of 50 µmol photons m -2 s-1. For 128 induction of the petJ promoter, CuSO4 was omitted from the medium. The 129 construction of a ∆pilB1 mutant and an integrative plasmid for the expression of a C- 130 terminal GFP-tagged PilB1 fusion protein under the control of the copper-sensitive 4 131 PpetJ promoter was described earlier (Linhartová et al., 2014; Schuergers et al., 132 2014). Absence of entire wild-type copies of pilB1 was tested using following primers: 133 pilB-up: 134 5'-CCAGATTCATGTCGATGGAG-3'. The construction of the pixJ1 mutant is 135 described in Fiedler et al. (2005). Immunoblot analysis was done on whole cell 136 protein extracts following standard procedures using anti-GFP antibody (Abcam). 5'-AATCACCGATGGTCACCATTG-3' and pilB-rev: 137 138 Phototaxis assay. Phototactic movement was analysed on 0.5% (w/v) BG11 agar 139 plates supplemented with 0.2% glucose and 10 mM TES buffer (pH 8.0). Cell 140 suspensions were spotted on the plates and incubated for 2-3 days under diffuse 141 white light (50 μmol photons m–2 s–1) before being placed into non-transparent boxes 142 with a one-sided opening (about 5 μmol photons m–2 s–1) for 7 days. 143 144 Epifluorescence microscopy. Micrographs were captured at room temperature 145 (20°C) using an upright Nikon Eclipse Ni-U microscope fitted with a 40x (numerical 146 aperture 0.75) and a 100x oil immersion objective (numerical aperture 1.45). For 147 visualisation of epifluorescence a GFP-filter block (excitation 450-490 nm; emission 148 500-550 nm; exposure time 200 ms) or a Cy3-filter block (excitation 530-560 nm; 149 emission 575-645 nm; exposure time 5 ms) were used. Cells were picked from a 150 moving colony of a phototaxis plate grown as described above, resuspended in a 151 small volume of fresh BG11 medium and 3 µl of the suspension was spotted on 0.3% 152 (w/v) BG11 agarose plates supplemented with 0.2% glucose and 10 mM TES buffer 153 (pH 8.0). Single cell movement was captured at 1 frame per 3 s and fluorescence 154 distribution and cell movement were analysed with Nikon BR software. 155 156 Confocal fluorescence microscopy. Micrographs were recorded with a Leica TCS- 157 SP5 laser-scanning confocal microscope with a 63x oil-immersion objective (NA 1.4). 158 Excitation was at 488 nm from an Argon laser. The confocal pinhole was set to give 159 resolution in the z-direction of ~ 1.5 µm and monochromator-defined emission 160 windows were at 503-515 nm for GFP and 670-720 nm for chlorophyll a. Images 161 were recorded at 12-bit resolution (512x512 pixels) at a line frequency of 400 Hz with 162 6x line averaging. Cells were grown on motility plates as for the phototaxis assay, 163 except that the agar concentration was increased to 1% (w/v), Pieces of agar with the 164 front of the moving colony were cut out and mounted under a cover-slip in a custom5 165 built sample holder. As a control, cells were fixed on the motility plates by careful 166 addition to the surface of the agar of a 5 µl drop of 0.25% glutaraldehyde solution in 167 0.125 M Sørensen’s phosphate buffer pH 7.2. 168 169 RESULTS 170 GFP-tagged PilB1 is functional for phototaxis 171 In order to visualise PilB1 in Synechocystis cells, we constructed a C-terminally GFP 172 tagged PilB1 protein as described in Schuergers et al. (2014) using the superfolder 173 gfp gene (gfp) and the psk9 based expression system which supports the integration 174 of the expression cassette into a neutral site of the chromosome (Kuchmina et al., 175 2012). PilB1-GFP expression is induced under copper-limited conditions and 176 repressed at 2.5 µM Cu2+. For expression we used a non-motile ΔpilB1 strain. ΔpilB1 177 cells lack natural competence for uptake of DNA via transformation, presumably 178 because of loss of T4P function. Therefore wild-type cells were first transformed with 179 the construct bearing the pilB1-gfp fusion gene, followed by transformation with 180 genomic DNA from a previously described ΔpilB1 strain (Linhartová et al., 2014; 181 Schuergers et al., 2014). PCR analysis showed that the resulting ΔpilB1/pilB1-gfp 182 strain was fully segregated (Fig. 1a) and therefore did not retain any functional copies 183 of the wild-type pilB1 gene. To verify the correct GFP tagging of PilB1, we performed 184 immunoblot analysis on whole cell extracts using α-GFP antibody (Fig. 1b), using as 185 a control a strain (WT/gfp) expressing a FLAG-tagged version of the superfolder GFP 186 protein (29.9 kDa) under the same copper-repressible promoter. A protein of around 187 100 kDa, corresponding to the predicted size of the PilB1-GFP fusion protein (102 188 kDa), was detected specifically in ΔpilB1/pilB1-gfp under inducing conditions (Fig. 189 1b). No smaller bands were detected in the immunoblot, indicating that all detectable 190 GFP in the cell was linked to the full-length PilB1 protein. As we do not have an α- 191 PilB1 antiserum, we were not able to directly compare levels of PilB1 in the wild type 192 and the ΔpilB1/pilB1-gfp strain. 193 For assessment of the phototactic motility of the ΔpilB1/pilB1-gfp strain, cells were 194 spotted on 0.5% BG11-agar that was either Cu2+-free or contained 2.5 µM Cu2+ to 195 inhibit pilB1-gfp expression. When cells were grown under weak directional 196 illumination, the wild-type colony formed finger-like projections extending towards the 197 light source that are characteristic of T4P-based phototactic motility of Synechocystis 198 (Fig. 1c). The ΔpilB1/pilB1-gfp strain displayed phototactic motility only under the 6 199 copper-limited conditions that induce the expression of PilB1-GFP (Fig. 1c), 200 indicating that the expression of PilB1-GFP from the PpetJ promoter restores 201 phototactic motility to the non-motile ΔpilB1 cells. This indicates that T4P are 202 assembled and functional in ΔpilB1/pilB1-gfp under inducing conditions. However, 203 the phototactic motility of ΔpilB1/pilB1-gfp is slower than that of the wild type (Fig. 204 1c). 205 206 PilB1-GFP shows a specific dynamic localisation pattern 207 Epifluorescence microscopy was used to observe the distribution of PilB1-GFP in 208 ΔpilB1/pilB1-gfp cells grown under inducing conditions and incubated under weak 209 illumination. Under these conditions we found a strong tendency for GFP 210 fluorescence to be concentrated at the periphery of the cell, in “crescents” located 211 specifically at one side of the cell (Fig. 2). Such a pattern of GFP localisation is not 212 observed in cells expressing free GFP, or in cells expressing other GFP-tagged 213 proteins associated with the cytoplasmic membrane (Bryan et al., 2014). This 214 indicates that the crescent-like distribution reflects a specific aspect of PilB1 215 behaviour. 216 To further examine PilB1-GFP distribution and dynamics we used confocal 217 fluorescence microscopy for better wavelength resolution and sharper resolution in 218 the z-direction (Fig. 3). Cells were grown on motility plates and placed in a sample 219 holder under the microscope stage. Images of chlorophyll a and GFP fluorescence 220 were recorded at 5 min intervals with negligible light exposure between frames. Fig. 221 3a,b show images of a field of cells packed densely enough to prevent lateral cell 222 movement on these timescales. The chlorophyll fluorescence image shows the 223 location of the thylakoid membranes, which are irregular and asymmetrical in 224 Synechocystis (Liberton et al., 2006). The lack of any significant change in the 225 chlorophyll fluorescence image shows that the cells neither move laterally nor rotate 226 on a 5-min timescale (Fig. 3a,b). Nevertheless, we could observe significant 227 redistribution of GFP fluorescence in some cells during the 5 min dark interval. Fig. 3 228 a,b highlight examples of cells where crescents form or disperse during the 5 min 229 interval. Some cells clearly display relocation of the PilB cresecents to a different part 230 of the cell periphery, suggesting that PilB dissociates from the cytoplasmic 231 membrane and then re-associates with a different area of the membrane (Fig. 3a,b). 232 As a control, we recorded similar images for a field of cells that had been fixed by 7 233 careful application of a small drop of glutaraldehyde solution to the surface of the 234 agar. We could not detect any redistribution of PilB-GFP in the glutaraldehyde-fixed 235 cells (Fig. 3c,d). These results indicate that PilB distribution is dynamic on a 236 timescale of 5 min or less: PilB concentrations at the plasma membrane can form, 237 disperse and relocate on these timescales. 238 239 The direction of twitching motility correlates with the localisation of PilB 240 To determine whether the localisation of PilB is connected with the direction of 241 twitching motility, ΔpilB1/pilB1-gfp cells grown under inducing conditions as 242 described for the phototaxis assays were spotted onto the surface of agar motility 243 plates and illuminated with weak red light on the epifluorescence microscope stage. 244 Cell density was kept low enough to ensure that cells could move freely on the agar 245 surface with only infrequent collisions. GFP fluorescence was observed intermittently 246 with excitation at 470 nm from the condenser light: we took care to minimise the 247 intensity and duration of exposure to this light, as exposure to bright blue light can 248 inhibit phototactic motility (Choi et al., 1999). Under these conditions, cells showed 249 twitching motility in apparently random directions, typically moving one cell diameter 250 (~ 3 µm) in about 45 s (Fig. 4a; Supplementary Movie 1). A strong correlation 251 between the orientation of PilB1-GFP crescents and the direction of movement is 252 immediately apparent (Fig. 4a; Supplementary Movie 1). To quantify this correlation 253 we tracked single cells showing a discernible crescents from three independent 254 experiments (n=58). We quantified this correlation by plotting a frequency distribution 255 for the angle between the direction of cell displacement over a 30 s time-window and 256 the orientation of the PilB1 crescent (a line drawn from the centre of the cell to the 257 middle of the crescent) (Fig. 4b). The mean deviation between the direction of 258 movement and the orientation of the crescent was -2.8° ± 27.4°, showing that almost 259 all cells move roughly in the direction of the crescent (Fig. 4b). 260 Mutants lacking the blue/green light receptor PixJ1 show negative phototaxis under 261 conditions when the wild type shows positive phototaxis (Bhaya et al., 2001; Fiedler 262 et al., 2005; Yoshihara & Ikeuchi, 2004). In order to test whether such mutants still 263 show twitching towards the PilB1 patches, we constructed a ΔpixJ1 mutant in a 264 ΔpilB1/pilB1-gfp background. Although the triple mutant shows negative phototaxis 265 on motility plates (not shown), individual cells still display PilB1-GFP with crescent- 8 266 like shape and the direction of their movement is strongly correlated with the 267 orientation of the crescent (Supplementary Movie 2). 268 269 9 270 271 Discussion 272 In the rod-shaped bacterium M. xanthus, the direction of twitching motility is 273 governed by the localisation of PilB and PilT, ATPases that are suggested to power 274 the extension and retraction of T4P by translocation of the PilA pilin subunits (Bulyha 275 et al., 2009; Jakovljevic et al., 2008). A fully functional apparatus for T4P-based 276 motility is formed by association of PilB and PilT with membrane-spanning protein 277 complexes located at the cell poles, which include PilC in the inner membrane and 278 PilQ in the outer membrane. A switch in direction involves the relocation of PilB and 279 PilT from one pole to the other, while the membrane complexes remain static and 280 located at both poles (Bulyha et al., 2009). Here we explore the localisation of the 281 twitching motility apparatus in Synechocystis, a cyanobacterium with spherical cells, 282 by visualisation of GFP-tagged PilB1. Expression of PilB1-GFP restored phototactic 283 motility to a non-motile ΔpilB1 mutant, confirming that PilB1 is essential for twitching 284 motility in Synechocystis and that PilB1-GFP is functional for motility. However, the 285 speed of long-distance phototaxis was lower in the ΔpilB1/pilB1-gfp strain than in the 286 wild type (Fig. 1), raising the possibility that either the GFP tag or the level of PilB1- 287 GFP expression lower the efficiency of pilus extension or the control of motility 288 direction. 289 As expected for a protein that has been shown in other bacteria to be associated with 290 the cytoplasmic membrane, we found that PilB1-GFP is concentrated around the 291 periphery of the cell (Fig. 2; Fig. 3), where we previously showed interaction and 292 partial co-localisation with Hfq, a protein that modulates transcript accumulation of 293 some RNA species (Schuergers et al., 2014). Under conditions that promote motility, 294 we found a strong tendency of PilB1-GFP to concentrate at one side of the cell, in a 295 configuration resembling a crescent-like shape (Fig. 2; Fig. 3). The localisation of 296 PilB1-GFP is quite dynamic, and the “crescents” sometimes form, disperse, or 297 relocate to another region of the cytoplasmic membrane during a 5 min dark 298 incubation (Fig. 3). PilB and PilT in M. xanthus and P. aeruginosa (Bulyha et al., 299 2009; Chiang et al., 2005) are restricted to two possible localisations at the 300 cytoplasmic membrane at the two cell poles. By contrast, the range of localisation 301 patterns and relocation behaviour of PilB1 in Synechocystis (Fig. 3) suggests that 302 patches of PilB1 could potentially form anywhere around the cytoplasmic membrane. 303 It is plausible that the T4P membrane-spanning complexes in Synechocystis are 304 dispersed all over the cell periphery, allowing PilB1 (and PilT) to form complexes 10 305 functional for T4P extension and retraction anywhere on the cell surface. Our results 306 indicate that PilB1 distribution is heterogeneous and dynamic, suggesting that, as in 307 M. xanthus, the direction of twitching motility is controlled by relocalisation of the T4P 308 extension and retraction motors. The potential for PilB1 and PilT concentrations to 309 form anywhere at the cell periphery could give Synechocystis the ability to move in 310 any direction, in contrast to M. xanthus which is restricted to a choice of two 311 directions depending on which is the leading pole and which is the lagging pole. 312 To test the idea that the localisation of the T4P motors controls the direction of 313 Synechocystis motility, we simultaneously monitored cell movement and PilB1-GFP 314 localisation, finding a very strong correlation between the position of PilB1 crescents 315 and the direction of movement (Fig. 4; Supplementary Movie 1). Thus the localisation 316 of the T4P extension apparatus coincides with the direction of motility. We have not 317 yet been able to determine the localisation of the PilT retraction motors in 318 Synechocystis, but given that they readily relocate in M. xanthus, it is likely that they 319 can also localise to the same regions of the membrane that are defined by to the 320 PilB1-GFP patches. Given the dynamic nature of PilB1 localisation in Synechocystis 321 (Fig. 3), it is very likely that switches of direction result from relocation of the T4P 322 motors to a different region of the cytoplasmic membrane. 323 Previous studies of Synechocystis phototaxis at the single-cell level suggest that 324 individual cells have ability to perceive and respond to the direction of illumination 325 (Choi et al., 1999; Ng et al., 2003). Photoreceptors including the blue/green light 326 absorbing proteins PixJ1 and Cph2, the blue-light receptor PixE and the UV-A 327 receptor UirS are involved in the regulation of phototaxis (Okajima et al., 2005a; 328 Song et al., 2011; Wilde et al., 2002; Yoshihara et al., 2000). Inactivation of pixJ1, 329 pixE as well as uirS (pixA) led to a reversal of cell movement on agar plates (Okajima 330 et al., 2005b; Song et al., 2011; Yoshihara et al., 2000). However, we found that loss 331 of PixJ1 had no obvious effect on the formation of PilB1-GFP crescents, and ΔpixJ1 332 cells still show a strong correlation between the direction of movement and the 333 orientation of the PilB1-GFP crescents (mean deviation 3.93° ± 39.8°, n=29) 334 (Supplementary Movie 2). Therefore ΔpixJ1 cells retain the same basic mechanism 335 of motility, but must be specifically impaired in the perception of light direction. Both 336 PixJ1 and UirS contain transmembrane domains and therefore these photoreceptors 337 could be in close proximity to the T4P motors. However, the details of the signalling 338 mechanism, and the mechanism of light direction sensing remain to be determined. 11 339 340 Acknowledgements 341 We thank Werner Bigott and Anne Leisinger for excellent technical assistance. DJN 342 was supported by a Queen Mary University of London studentship. 343 344 References 345 346 347 Bhaya, D., Bianco, N. R., Bryant, D. & Grossman, A. (2000). Type IV pilus biogenesis and motility in the cyanobacterium Synechocystis sp. PCC6803. Mol Microbiol 37, 941–951. 348 349 350 Bhaya, D., Takahashi, A. & Grossman, A. R. (2001). Light regulation of type IV pilus-dependent motility by chemosensor-like elements in Synechocystis PCC6803. Proc Natl Acad Sci USA 98, 7540–7545. 351 352 353 Bhaya, D., Nakasugi, K., Fazeli, F. & Burriesci, M. S. (2006). Phototaxis and impaired motility in adenylyl cyclase and cyclase receptor protein mutants of Synechocystis sp. strain PCC 6803. J Bacteriol 188, 7306–7310. 354 355 356 357 Bryan, S. J., Burroughs, N. J., Shevela, D., Yu, J., Rupprecht, E., Liu, L.-N., Mastroianni, G., Xue, Q., Llorente-Garcia, I. & other authors. (2014). Localisation and interactions of the Vipp1 protein in cyanobacteria. Mol Microbiol, in press 358 359 360 361 Bulyha, I., Schmidt, C., Lenz, P., Jakovljevic, V., Höne, A., Maier, B., Hoppert, M. & Søgaard-Andersen, L. (2009). Regulation of the type IV pili molecular machine by dynamic localization of two motor proteins. Mol Microbiol 74, 691– 706. 362 363 Burrows, L. L. (2012). Pseudomonas aeruginosa twitching motility: Type IV pili in action. Annu Rev Microbiol 66, 493–520. 364 365 366 Chiang, P., Habash, M. & Burrows, L. L. (2005). Disparate subcellular localization patterns of Pseudomonas aeruginosa Type IV pilus ATPases involved in twitching motility. J Bacteriol 187, 829–839. 367 368 369 370 Choi, J. S., Chung, Y. H., Moon, Y. J., Kim, C., Watanabe, M., Song, P. S., Joe, C. O., Bogorad, L. & Park, Y. M. (1999). Photomovement of the gliding cyanobacterium Synechocystis sp. PCC 6803. Photochem Photobiol 70, 95– 102. 371 372 373 Fiedler, B., Börner, T. & Wilde, A. (2005). Phototaxis in the cyanobacterium Synechocystis sp. PCC 6803: role of different photoreceptors. Photochem Photobiol 81, 1481–1488. 374 375 376 Gorby, Y. A., Yanina, S., McLean, J. S., Rosso, K. M., Moyles, D., Dohnalkova, A., Beveridge, T. J., Chang, I. S., Kim, B. H. & other authors. (2006). Electrically conductive bacterial nanowires produced by Shewanella oneidensis 12 377 378 strain MR-1 and other microorganisms. Proc Natl Acad Sci USA 103, 11358– 11363. 379 380 381 Jakovljevic, V., Leonardy, S., Hoppert, M. & Søgaard-Andersen, L. (2008). PilB and PilT are ATPases acting antagonistically in type IV pilus function in Myxococcus xanthus. J Bacteriol 190, 2411–2421. 382 383 384 Liberton, M., Howard Berg, R., Heuser, J., Roth, R. & Pakrasi, H. B. (2006). Ultrastructure of the membrane systems in the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. Protoplasma 227, 129–138. 385 386 387 388 Linhartová, M., Bučinská, L., Halada, P., Ječmen, T., Šetlík, J., Komenda, J. & Sobotka, R. (2014). Accumulation of the Type IV prepilin triggers degradation of SecY and YidC and inhibits synthesis of Photosystem II proteins in the cyanobacterium Synechocystis PCC 6803. Mol Microbiol, in press 389 390 Mattick, J. S. (2002). Type IV pili and twitching motility. Annu Rev Microbiol 56, 289– 314. 391 392 Ng, W.-O., Grossman, A. R. & Bhaya, D. (2003). Multiple light inputs control phototaxis in Synechocystis sp. Strain PCC6803. J Bacteriol 185, 1599–1607. 393 394 395 396 Okajima, K., Yoshihara, S., Fukushima, Y., Geng, X., Katayama, M., Higashi, S., Watanabe, M., Sato, S., Tabata, S. & other authors. (2005a). Biochemical and functional characterization of BLUF-type flavin-binding proteins of two species of cyanobacteria. J Biochem 137, 741–750. 397 398 399 400 Okajima, K., Yoshihara, S., Fukushima, Y., Geng, X., Katayama, M., Higashi, S., Watanabe, M., Sato, S., Tabata, S. & other authors. (2005b). Biochemical and functional characterization of BLUF-type flavin-binding proteins of two species of cyanobacteria. J Biochem 137, 741–750. 401 402 403 Peabody, C. R., Chung, Y. J., Yen, M.-R., Vidal-Ingigliardi, D., Pugsley, A. P. & Saier, M. H. (2003). Type II protein secretion and its relationship to bacterial type IV pili and archaeal flagella. Microbiology 149, 3051–3072. 404 Pelicic, V. (2008). Type IV pili: e pluribus unum? Mol Microbiol 68, 827-837. 405 406 407 Rippka, R., Deruelles, J., Waterbury, J. B., Herdman, M. & Stanier, R. Y. (1979). Generic assignments, strain histories and properties of pure cultures of cyanobacteria. J Gen Microbiol 111, 1–61. 408 409 410 411 Schuergers, N., Ruppert, U., Watanabe, S., Nürnberg, D. J., Lochnit, G., Dienst, D., Mullineaux, C. W. & Wilde, A. (2014). Binding of the RNA chaperone Hfq to the type IV pilus base is crucial for its function in Synechocystis sp. PCC 6803. Mol Microbiol 92, 840–852. 412 413 414 415 Song, J. Y., Cho, H. S., Cho, J. Il, Jeon, J. S., Lagarias, J. C. & Park, Y. Il. (2011). Near-UV cyanobacteriochrome signaling system elicits negative phototaxis in the cyanobacterium Synechocystis sp. PCC 6803. Proc Natl Acad Sci USA 108, 10780–10785. 13 416 417 Wadhams, G. H. & Armitage, J. P. (2004). Making sense of it all: bacterial chemotaxis. Nat Rev Mol Cell Biol 5, 1024–1037. 418 419 Wilde, A., Fiedler, B. & Börner, T. (2002). The cyanobacterial phytochrome Cph2 inhibits phototaxis towards blue light. Mol Microbiol 44, 981–988. 420 421 422 423 Yoshihara, S., Suzuki, F., Fujita, H., Geng, X. X. & Ikeuchi, M. (2000). Novel putative photoreceptor and regulatory genes required for the positive phototactic movement of the unicellular motile cyanobacterium Synechocystis sp. PCC 6803. Plant Cell Physiol 41, 1299–1304. 424 425 426 427 Yoshihara, S., Geng, X., Okamoto, S., Yura, K., Murata, T., Go, M., Ohmori, M. & Ikeuchi, M. (2001). Mutational analysis of genes involved in pilus structure, motility and transformation competency in the unicellular motile cyanobacterium Synechocystis sp. PCC 6803. Plant Cell Physiol 42, 63–73. 428 429 430 Yoshihara, S. & Ikeuchi, M. (2004). Phototactic motility in the unicellular cyanobacterium Synechocystis sp. PCC 6803. Photochem Photobiol Sci 3, 512– 518. 431 432 14 433 Figure legends 434 Fig. 1: The PilB1-GFP fusion protein is properly expressed and restores 435 motility of a ΔpilB1 mutant in a phototaxis assay. (a) Complete segregation of 436 mutant ΔpilB1 copies in the ΔpilB1/pilB1-gfp strain was verified via PCR (b) 437 Immunoblot analysis of total protein from ΔpilB1/pilB1-gfp cells in comparison to a 438 strain expressing the free GFP protein using the PpetJ based expression cassette 439 under inducing (no Cu2+) and repressing (2.5 µM Cu2+) conditions. (c) Synechocystis 440 wild-type and ΔpilB1/pilB1-gfp cells were spotted onto 0.5% agar motility plates with 441 or without copper and incubated for 7 days under unidirectional illumination. Dotted 442 lines show the initial position of spotted cells. 443 444 Fig. 2: PilB1-GFP tends to localise in a non-uniform crescent-like pattern along 445 the cell periphery. ΔpilB1/pilB1-gfp cells grown on copper-free BG11 plates were 446 resuspended in fresh BG11 medium, spotted on glass slides and observed by 447 epifluorescence microscopy under dim illumination (< 0.5 μmol photons m –2 s–1). (a) 448 Phase contrast image (b) chlorophyll fluorescence (c) GFP fluorescence (d) merged 449 signals from GFP and chlorophyll fluorescence. 450 451 Fig. 3: Dynamic redistribution of PilB-GFP fluorescence within cells. 452 ΔpilB1/pilB1-gfp cells were grown under weak directional illumination on copper-free 453 1% agar motility plates. Pieces of agar were cut from the plates, mounted under a 454 coverslip and imaged by confocal fluorescence microscopy, with simultaneous 455 visualization of GFP (green) and chlorophyll (red) fluorescence. The images show a 456 region where cells were too densely packed to move. (a) Image recorded 457 immediately after mounting the sample. (b) Image of the same field of cells recorded 458 5 min later, with the cells kept under negligible light in the interval. The coloured dots 459 highlight cells where various kinds of redistribution of GFP fluorescence were 460 observed: formation or dispersal of bright patches of GFP fluorescence at the cell 461 periphery, or relocation of patches of GFP fluorescence (as indicated by 462 simultaneous loss of GFP fluorescence at one part of the cell periphery, and 463 increased GFP fluorescence at another part of the cell periphery). Note, however, 464 that in the case of fluorescence losses we cannot exclude the possibility that these 465 are due to local GFP bleaching rather than redistribution of PilB-GFP. (c,d) As a 466 control images were recorded with a 5 min interval as in (a,b) except that cells were 15 467 fixed with a drop of 0.25% glutaraldehyde solution before cutting agar blocks from the 468 motility plates. 469 Fig. 4: PilB1-GFP localisation correlates with the direction of single cell 470 motility. ΔpilB1/pilB1-gfp cells grown on copper-free BG11 phototaxis plates were 471 resuspended in fresh medium, spotted on 0.3% agarose motility plates and 472 illuminated with red light (cut-off filter, LEE filters Nr. 106) at 0.5 μmol photons m –2 473 s-1. After 10 min, PilB1-GFP localisation and cell movement were monitored for 1 min 474 by imaging fluorescence at 3 s intervals. (a) Sequential fluorescence images of two 475 representative cells. The initial position of the moving cells is indicated by a dashed 476 circle. See also Supplementary Movie 1. (b) Frequency histogram of the angle (α) 477 between the centre of PilB1 orientation at 0 s and the cell displacement after 30 s 478 (see box). 59 cells showing single cell motility and a clear crescent-like PilB1 479 localisation from three different motility plates were analysed. A fitted normal 480 distribution is shown by the dashed line. 481 482 Supplementary Movie 1: Twitching motility of ΔpilB1/pilB1-gfp cells and subcellular 483 distribution of PilB1-GFP. Frames were recorded at 3 s intervals over a 60 s period. 484 See also Fig. 4. 485 486 Supplementary Movie 2: Twitching motility of ΔpixJ1/ΔpilB1/pilB1-gfp cells and 487 subcellular distribution of PilB1-GFP. Frames were recorded at 3 s intervals over a 488 60 s period. 489 490 16