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Full Text
Full Text

... maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. Data available from TAIR includes the complete genome sequence along with gene structure, gene product information, metabolism, gene expression, DNA and seed stocks, genome maps, genetic and p ...
Genetic Inheritance Problems - Exercise 9
Genetic Inheritance Problems - Exercise 9

... Dihybrid Cross – two characters EXPERIMENT Two true-breeding pea plants— one with yellow-round seeds and the other with greenwrinkled seeds—were crossed, producing dihybrid F1 plants. Self-pollination of the F1 dihybrids, which are heterozygous for both characters, produced the F2 generation. The t ...
Prof. Kamakaka`s Lecture 16 Notes
Prof. Kamakaka`s Lecture 16 Notes

... Catabolite Repression of the lac operonWhen we introduced the subject of regulation of gene expression, I gave an example of the response of E. coli when placed in a media containing both glucose and lactose. The induction of the lac operon does not occur until all the glucose has been metabolized. ...
Slide 1
Slide 1

... sugar abundant in milk; most humans are born with this gene switched on in their digestive systems. The gene turns off and adults may have difficulty digesting lactase. One way around the problem is to let bacteria digest the lactose and turn the milk into cheese. Cheese, being low in lactose, is ea ...
repetitive extragenic palindromic sequences in pseudomonas
repetitive extragenic palindromic sequences in pseudomonas

... sequences within a cluster shared a practically identical sequence while the fragments following negatively oriented REP sequences shared another sequence Considering the conserved palindromy of REP sequences and the conserved arrangement of the clusters it is probable that REP sequences adopt conf ...
Np73 is capable of inducing apoptosis by co
Np73 is capable of inducing apoptosis by co

... overexpressed in several tumours [4]. However, many times those same tumours also express high amounts of TAp73, somehow suggesting that Np73 has other functions than just interfering with the action of TA isoforms. Supporting this idea, it has been reported that overexpression of Np73-α in a p53 ...
Abundance of an mRNA is the average number of molecules per cell
Abundance of an mRNA is the average number of molecules per cell

... Conditional lethal mlutations kill a cell or virus under certain (nonpermissive) conditions, but allow it to survive under other (permissive) conditions. Conjugation describes ‘mathing’ between two bacterial cells, when (part of ) the chromosome is transferred from one to the other. Consensus sequen ...
Sample Chapter
Sample Chapter

... the chromosomes. They show the order of linked genes and pairwise distances between their loci. During meiosis, as the haploid egg and sperm cells form, homologous chromosomes (maternally and paternally derived) line up, and DNA segments can be exchanged between the homologs. The new combinations of ...
toxicity in bread wheat - BMC Plant Biology
toxicity in bread wheat - BMC Plant Biology

... and MATE1 were regulated by these transcription factors [18,19]. Recently, the contribution of ART1 locus to the variation for Al tolerance in rice has also been identified in QTL analysis [20]. The limited impact of single functional genes in plant stress tolerance has been associated with the poly ...
notes
notes

... Rarer than Prader-Willi Missing SAME piece of Chromosome #15 ...
Solutions for Recombinant DNA Unit Exam
Solutions for Recombinant DNA Unit Exam

... f) Your friend suggests that you use her yeast cDNA library to attempt to restore an arg– bacterial cell to arginine prototrophy. i) Briefly describe how a cDNA library is different from a genomic library. Possible answers: 1. cDNA library is generated from mRNA, so introns have already been spliced ...
Molecular cloning, characterization, and homologous
Molecular cloning, characterization, and homologous

... polymerase (Fermentas). PCR was carried out in 40 cycles: 1 min at 94 °C, 1 min at 55 °C, and 2 min at 72 °C. The initial denaturation was carried out at 94 °C for 3 min. The final extension was performed for 10 min at 72 °C. Reaction mixtures were run in a 0.8% agarose gel. PCR products were extrac ...
Conflicting patterns of mitochondrial and nuclear DNA diversity in
Conflicting patterns of mitochondrial and nuclear DNA diversity in

... (García-Moreno 2004; Lovette 2004), the qualitative conclusions of our results will remain even with very different rates. The amount of within-species genetic variation for each locus was estimated as nucleotide diversity (π) and segregating sites (s) in dnasp (Rozas & Rozas 1997). We used Tajima’s ...
The information in this document is meant to cover topic 4 and topic
The information in this document is meant to cover topic 4 and topic

... hemophilia,  both  located  on  the  X-­‐chromosome.    Females  must  be  homozygous  for  these   conditions  to  express  the  condition,  as  presence  of  the  dominant  allele  on  their  second  X-­‐ chromosome  would  result  in   ...
Expression of phosphofructokinase in Neisseria meningitidis
Expression of phosphofructokinase in Neisseria meningitidis

... balance analysis predicted an increase of biomass yield as a result of PFK expression. However, analysis of a genetically engineered N. meningitidis strain that expressed a heterologous PFK showed that the yield of biomass on substrate decreased in comparison with a pfkA-deficient control strain, wh ...
Characterization of Rice Anthranilate Synthase
Characterization of Rice Anthranilate Synthase

... the NH2-terminal region of the encoded protein was missing from the OASA2 clones. To determine the nucleotide sequence of the missing 5⬘ region of the OASA2 ORF we partially sequenced a genomic DNA clone. Digestion of genomic DNA with EcoRI yielded fragments of approximately 6.2 and 6.4 kb, which hy ...
Bioinformatics Resources at a Glance A Note about FASTA Format
Bioinformatics Resources at a Glance A Note about FASTA Format

... look at both nucleotide and protein sequences, it is important that they come from the  same gene. This reference sequence map ensures that the two sequences correspond.  ...
XSL Formatter - H:\XML
XSL Formatter - H:\XML

... tutorials or for adding new ones. ...
Genomic surveys and expression analysis of bZIP gene family in
Genomic surveys and expression analysis of bZIP gene family in

... 17 bp tags with different adaptors of both ends to generate a tag library. After 15 cycles of linear PCR amplification, 105 bp fragments were purified by 6 % PAGE gel electrophoresis. After denaturing, the single-chain molecules were fixed onto the illumina sequencing chip (flow cell). Each molecule ...
FREE Sample Here
FREE Sample Here

... sense of the B-DNA helix. The phosphates in the backbone zigzagged; hence, they called this new form Z-DNA. Section: 4.2 and Figure 4.16 47. What are two features of mature eukaryotic mRNA that are unique as compared to prokaryotic mRNA? Ans: Eukaryotic mRNA has a special nucleotide “cap” at the 5' ...
HST.161 Molecular Biology and Genetics in Modern Medicine
HST.161 Molecular Biology and Genetics in Modern Medicine

... can now predict what would be expected for each of the diseases mentioned: Cystic fibrosis – Most individuals with CF carry a mutant allele that of ancient origin. Thus, most of these individuals would be expected to be homozygous for the C allele at the SNP site. Since we know that the allele frequ ...
Intro to Mendelian Genetics
Intro to Mendelian Genetics

... • each chromosome has genes (a gene is a segment of DNA that controls a trait – ex. height) • there can be different forms (versions) of the same gene; these different forms are called alleles – ex. for the height gene, the alleles are tall and short ...
Transcription Factors Underlying the Development and Endocrine
Transcription Factors Underlying the Development and Endocrine

... the placental cell lineages, combined with the fact that the placenta is so sensitive to genetic perturbation, the placenta is an attractive model system for understanding the control of stem cells, cell lineage, and cell-cell interactions (Cross, 2000; Hemberger and Cross, 2001). The placenta is de ...
Nomenclature for factors of the Dog Major
Nomenclature for factors of the Dog Major

... regions. This decision was taken for several reasons. Firstly, data from other species suggest that alleles which share HVRs also share antigen binding specificity and thus have functional similarity. Although there are no functional data nor crystalline structures yet available for the MHC loci of ...
Coat Color Mutations, Animals
Coat Color Mutations, Animals

... of multiple alleles at a single locus can be a powerful tool in any genetic system; consequently experimental results based on the specific locus test have played an important role in the history of coat color gene action. Discussing genes, mutations, and loci can be confusing, since the meaning of ...
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RNA-Seq



RNA-seq (RNA sequencing), also called whole transcriptome shotgun sequencing (WTSS), is a technology that uses the capabilities of next-generation sequencing to reveal a snapshot of RNA presence and quantity from a genome at a given moment in time.
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