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Topic 3
Topic 3

... Amino acid ...
The biomolecules of terrestrial life
The biomolecules of terrestrial life

... Proteins are polymers of amino acids Short chains of amino acids are called peptydes Long, unbranched peptyde chains are called polypeptides Proteins are formed by one or more chains of polypeptides Molecular masses of proteins vary between ~103 e ~106 atomic mass units They contribute to about half ...
Unit 2: Metabolic Processes Metabolism and Energy
Unit 2: Metabolic Processes Metabolism and Energy

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Proteins, lipids, carbohydrates and nucleic acids

... There are many different types of steroids. They are all lipids. Their functions vary. Some common steroids are: ...
Protein engineering: navigating between chance and reason
Protein engineering: navigating between chance and reason

Lecture: Biochemistry
Lecture: Biochemistry

... Proteins 1. Molecular Structure of Proteins a. 20 different amino acids (same in all life) i. amino end (NH2) ii. acid group (COOH) iii. R-group unique for each amino acid b. dehydration synthesis joins amino acids i. called a peptide bond ii. dipeptide - 2 amino acids iii. tripeptide - 3 amino acid ...
Protein visualization
Protein visualization

lecture08_12
lecture08_12

... - ProSite a database of protein patterns that can be searched by either regular expression patterns or sequence profiles. - PHI BLAST Searching a specific protein sequence pattern with local alignments surrounding the match. -MEME searching for a common motifs in unaligned sequences ...
LECTURE #25: Translation
LECTURE #25: Translation

... ribosomes along (ribosomal RNA) with proteins ...
biochemistry
biochemistry

... •glucose, "blood sugar", the immediate source of energy for cellular respiration •galactose, a sugar in milk (and yogurt), and •fructose, a sugar found in honey. Although all three share the same molecular formula (C6H12O6), the arrangement of atoms differs in each case. Substances such as these thr ...
CHAPTER 5 CARBON CONTENT: LOW LARGE HYDROPHOBIC
CHAPTER 5 CARBON CONTENT: LOW LARGE HYDROPHOBIC

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HIVstructureNickiSamFINAL

... • There were changes between the non-progressors and subject 8 that could account for subject 8 being a moderate progressor. • Secondary structure was not affected by these changes in sequence. ...
3.5 What are the chemical structures and functions of nucleic acids?
3.5 What are the chemical structures and functions of nucleic acids?

... Functional groups are small groups of atoms that are consistently found together in a variety of different macromolecules. Functional groups have particular chemical properties that they confer on any larger molecule of which they are a part. Review Figure 3.1, Web/CD Activity 3.1 Structural and opt ...
Amino Acids
Amino Acids

AMINO ACIDS & PEPTIDES (BIO MEDICAL IMPORTANCE)
AMINO ACIDS & PEPTIDES (BIO MEDICAL IMPORTANCE)

... synthesis of important biological compounds by: Incorporation as Entire Molecule. Donating Amino Group. Donating entire or partial Carbon Skeleton. ...
Organic Compounds PowerPoint PDF
Organic Compounds PowerPoint PDF

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NucPred—Predicting nuclear localization of

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Organic Compounds

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Nickel-NTA-Nanogold Binds His
Nickel-NTA-Nanogold Binds His

... expression organism lysate, since it was found that the 6x-His tag specifically binds (reversibly) to columns containing Ni+2 [1] . The nickel is chelated to the column with nitrilotriacetic acid (NTA), which is similar to EDTA. Since many proteins now have His-tags, and cells can be transfected to ...
Evidence for Evolution Webquest
Evidence for Evolution Webquest

... 9. List examples of homologous structures found in nature. A. C. B. D. 10. Use BEYOND THE OBVIOUS page to answer the following question. Do all homologous structures look alike? Why or Why not? _________________________________________________________ ________________________________________________ ...
Molecules of Life - CCRI Faculty Web
Molecules of Life - CCRI Faculty Web

... VERY important functions in cells ...
Biochemistry
Biochemistry

... Basic formula is C12H22O11 Two monosaccharides have been linked and a water lost The bond holding the sugars together is a glycosidic bond Isomers—same chemical formula with different structures ...
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Outline

... Archibald Garrod describes “inborn errors of metabolism” blocks a metabolic pathway, causing accumulation of an intermediate in the pathway Beadle and Tatum experiment induced mutations in Neurospora crassa with x-rays found mutants that were arginine (an amino acid) auxotrophs, so they needed added ...
Level 2 Biology - No Brain Too Small
Level 2 Biology - No Brain Too Small

...  No Brain Too Small  BIOLOGY  ...
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They do NOT like water!

... – Sugar is deoxyribose. ...
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Protein structure prediction



Protein structure prediction is the prediction of the three-dimensional structure of a protein from its amino acid sequence — that is, the prediction of its folding and its secondary, tertiary, and quaternary structure from its primary structure. Structure prediction is fundamentally different from the inverse problem of protein design. Protein structure prediction is one of the most important goals pursued by bioinformatics and theoretical chemistry; it is highly important in medicine (for example, in drug design) and biotechnology (for example, in the design of novel enzymes). Every two years, the performance of current methods is assessed in the CASP experiment (Critical Assessment of Techniques for Protein Structure Prediction). A continuous evaluation of protein structure prediction web servers is performed by the community project CAMEO3D.
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